The Experimental Reef Lab
A tool for simulating dynamic future conditions on contemporary reef organisms
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Our Research
The Experimental Reef Lab (ERL) at the University of Miami was designed and built by scientists at AOML and the Cooperative Institute for Marine and Atmospheric Science (CIMAS) for the purpose of finely manipulating temperature, pH, light and dissolved oxygen to mirror projected ocean conditions for coral research. Using custom-built technology, these conditions can be controlled with a high precision and accuracy.
With the fully-automated logging and control system, scientists at AOML can monitor and manipulate multiple seawater parameters in real time.
Explore the capabilities of ERL and what we’ve built by clicking the icons below:
Who We Are
Research Key Impacts
ERL was first designed in 2016. Since then, we’ve completed a variety of experiments and published numerous papers highlighting the impacts of disease, changes in pH and greater sea surface temperatures on essential reef-building coral species while leveraging the technology in this space. In 2024, we completed the building of our newly renovated ERL2 with all new capabilities that are already enabling us to scale up these efforts. With the added ability to manipulate dissolved oxygen levels within each tank, we can investigate the impacts of hypoxia (lower-oxygen levels) on corals and identify key thresholds. Adding to this, we can expose corals to multiple environmental stressors – combinations of lower pH and hypoxic conditions, disease and greater sea surface temperatures, etc – all to mirror expected future ocean conditions and understand how coral reefs will be impacted – while seeking new and innovative ways to enhance their resilience.
Explore our Experimental Reef Lab Tank Data in Real-Time
Click the icon to see what is happening in all of these aquaria in real-time. We are constantly manipulating the sea surface temperature, pH, dissolved oxygen levels and additional factors that we’re exposing key coral species to, and this data viewer shows what conditions we are changing while performing active experiments.
Driving Innovative Science
With Experimental Design
AOML’s Ocean Chemistry and Ecosystems Division has taken a visionary approach to answering our most pressing questions about coral reef health by embracing new technology to engineer in-house solutions. This lab was built with in-house materials and technology from the Advanced Manufacturing and Design Lab.
While exposing corals to various oceanic conditions, we can manipulate the seawater chemistry in real-time on the touch screen above all aquaria, and we can add dynamic set points that change hourly to mimic the natural variability that occurs on coral reefs (e.g. changes in temperature between day and night).
Independent Controller System
Coral reefs naturally experience diurnal (daily) changes in O2 (Oxygen) concentration and pH due to numerous processes such as daytime photosynthesis as well as respiration. Ocean acidification will lower the average pH that reef organisms experience and it will also change the range of conditions that they experience.
All aquaria can be programmed to manipulate the chemistry in real-time on the screen, and we can add dynamic set points that change hourly to mimic the natural variability that occurs on coral reefs.

Primary Dashboard
To see what is happening in each of the 16 tanks, we have integrated a primary control system that displays the fluctuations in conditions over a 24-hour period and communicates with the independent control systems (i.e. touch screens) on each tank.
Managing Seawater Chemistry within Each Aquarium
Our team designed and built the Sump system as a way to deliver precise gas mixtures that manipulate the seawater constantly flowing through each of these aquaria. Based on communications with the control system, we can automate changes in pH, temperature, and dissolved oxygen levels, exposing corals to ocean acidification, hypoxia and greater temperatures with high precision and accuracy. Changing gas concentrations – specifically carbon and nitrogen – before they reach each tank means we can expose coral fragments to conditions like acidification and hypoxia.
Maintaining A Filtration System
Performing these experiments across each independent aquarium requires infrastructure to constantly circulate seawater and maintain consistent water quality so that we are only examining a coral’s response to changes in those conditions that we are finely manipulating. With the Experimental Reef Lab, we have a filtration system that brings seawater from Biscayne Bay into the lab.
Integrating Robotic Automation
In the Experimental Reef Lab, scientists at NOAA’s Atlantic Oceanographic and Meteorological Laboratory (AOML) and the Cooperative Institute for Marine and Atmospheric Studies (CIMAS) are investigating how crucial reef-building coral species are affected by the impacts of environmental stressors using a suite of open-source robotic arms designed and built at AOML. Jump to see how they’re being implemented in restoration pipelines.
Designing the Experimental Reef Lab
Scientists at AOML designed and built a variety of the technology within the Experimental Reef Lab. Leveraging the Advanced Manufacturing and Design Lab (AMDL), the team created designs of the new system using open-source software, printed various components and tested their durability throughout each stage of the buildout.
Explore open-source CAD designs of the newly renovated Experimental Reef Lab here
Experimental Applications
Click each section to learn more about our research and how we’ve used the Experimental Reef Lab to examine coral resilience to specific environmental conditions.
We are leading stewards of a cleaner, healthier, more sustainable ocean.
We are using state of the art techniques for measuring coral growth and calcification. This video shows how we can assemble hundreds of x-ray images into a 3D model of endangered staghorn coral. This type of analysis allows us to look at skeletal density, structure, and coral growth in very high detail. These aspects of the coral will be influenced by ocean acidification and are important characteristics to consider when establishing management and restoration strategies.
Featured Publication
Marked annual coral bleaching resilience of an inshore patch reef in the Florida Keys: A nugget of hope, aberrance, or last man standing?
Annual coral bleaching events, which are predicted to occur as early as the next decade in the Florida Keys, are expected to cause catastrophic coral mortality. Despite this, there is little field data on how Caribbean coral communities respond to annual thermal stress events. At Cheeca Rocks, an inshore patch reef near Islamorada, FL, the condition of 4234 coral colonies was followed over 2 yr of subsequent bleaching in 2014 and 2015, the two hottest summers on record for the Florida Keys. In 2014, this site experienced 7.7 degree heating weeks (DHW) and as a result 38.0% of corals bleached and an additional 36.6% were pale or partially bleached. In situ temperatures in summer of 2015 were even warmer, with the site experiencing 9.5 DHW. Despite the increased thermal stress in 2015, only 12.1% of corals were bleached in 2015, which was 3.1 times less than 2014.
Partial mortality dropped from 17.6% of surveyed corals to 4.3% between 2014 and 2015, and total colony mortality declined from 3.4 to 1.9% between years. Total colony mortality was low over both years of coral bleaching with 94.7% of colonies surviving from 2014 to 2016. The reduction in bleaching severity and coral mortality associated with a second stronger thermal anomaly provides evidence that the response of Caribbean coral communities to annual bleaching is not strictly temperature dose dependent and that acclimatization responses may be possible even with short recovery periods. Whether the results from Cheeca Rocks represent an aberration or a true resilience potential is the subject of ongoing research.
Bleached Reef (Oct 9)
Recovered Reef (Nov 6)Gintert, B. E., Manzello, D. P., Enochs, I. C., Kolodziej, G., Carlton, R., Gleason, A. C., & Gracias, N. (2018). Marked annual coral bleaching resilience of an inshore patch reef in the Florida Keys: A nugget of hope, aberrance, or last man standing?. Coral Reefs, 1-15.














