2018-03-01 06:58:25,063 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 06:58:12 2018-03-01 07:00:45,362 INFO repeater task os75nb_quick starting 3.7 seconds late 2018-03-01 07:00:47,600 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:00:47,600 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:00:47,600 INFO repeater task os75nb_lastvec starting 6.0 seconds late 2018-03-01 07:00:47,961 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 07:03:13,237 INFO repeater task os75nb_3dayplots starting 1.6 seconds late 2018-03-01 07:03:18,174 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:03:18,174 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 07:03:18,174 INFO repeater task os75nb_tsstats starting 6.5 seconds late 2018-03-01 07:03:18,792 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 07:03:18,793 INFO repeater task os75nb_10pings starting 7.2 seconds late 2018-03-01 07:03:18,897 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 07:03:18,897 INFO repeater task os75nb_beamplots starting 7.3 seconds late 2018-03-01 07:03:19,850 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 07:03:19,850 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 07:03:19,850 INFO repeater task os75nb_beamplots starting 8.2 seconds late 2018-03-01 07:03:20,843 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 07:03:20,843 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 07:03:20,843 INFO repeater task posmv_hcorrstats starting 9.0 seconds late 2018-03-01 07:03:21,714 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 07:03:21,714 INFO repeater task posmv_plotposmv starting 9.9 seconds late 2018-03-01 07:03:24,738 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 07:03:24,738 INFO repeater task report_generator starting 12.9 seconds late 2018-03-01 07:03:28,565 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 165 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 165 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 07:03:28,565 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 07:03:33,571 INFO repeater task os75nb_lastensq starting 11.6 seconds late 2018-03-01 07:03:35,561 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:03:35,561 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:03:35,561 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:03:12 2018-03-01 07:05:55,861 INFO repeater task os75nb_quick starting 4.2 seconds late 2018-03-01 07:05:58,049 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:05:58,049 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:05:58,049 INFO repeater task os75nb_lastvec starting 6.4 seconds late 2018-03-01 07:05:58,385 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 07:08:13,665 INFO repeater task os75nb_3dayplots starting 2.0 seconds late 2018-03-01 07:08:18,562 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:08:18,562 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 07:08:23,569 INFO repeater task os75nb_lastensq starting 1.6 seconds late 2018-03-01 07:08:25,543 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:08:25,543 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:08:25,543 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:08:12 2018-03-01 07:11:05,861 INFO repeater task os75nb_quick starting 4.2 seconds late 2018-03-01 07:11:08,084 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:11:08,084 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:11:08,084 INFO repeater task os75nb_lastvec starting 6.4 seconds late 2018-03-01 07:11:08,427 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 07:13:13,699 INFO repeater task os75nb_3dayplots starting 2.1 seconds late 2018-03-01 07:13:18,459 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:13:18,459 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 07:13:23,464 INFO repeater task os75nb_lastensq starting 1.5 seconds late 2018-03-01 07:13:25,423 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:13:25,423 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:13:25,423 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:13:12 2018-03-01 07:16:15,770 INFO repeater task os75nb_quick starting 4.1 seconds late 2018-03-01 07:16:17,971 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:16:17,972 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:16:17,972 INFO repeater task os75nb_lastvec starting 6.3 seconds late 2018-03-01 07:16:18,312 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 07:18:13,553 INFO repeater task os75nb_3dayplots starting 1.9 seconds late 2018-03-01 07:18:18,433 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:18:18,433 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 07:18:18,433 INFO repeater task os75nb_tsstats starting 6.8 seconds late 2018-03-01 07:18:19,037 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 07:18:19,038 INFO repeater task os75nb_10pings starting 7.4 seconds late 2018-03-01 07:18:19,140 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 07:18:19,140 INFO repeater task os75nb_beamplots starting 7.5 seconds late 2018-03-01 07:18:20,099 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 07:18:20,099 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 07:18:20,100 INFO repeater task os75nb_beamplots starting 8.5 seconds late 2018-03-01 07:18:21,061 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 07:18:21,061 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 07:18:21,061 INFO repeater task posmv_hcorrstats starting 9.3 seconds late 2018-03-01 07:18:21,934 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 07:18:21,934 INFO repeater task posmv_plotposmv starting 10.1 seconds late 2018-03-01 07:18:24,951 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 07:18:24,951 INFO repeater task report_generator starting 13.2 seconds late 2018-03-01 07:18:28,759 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 165 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 165 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 07:18:28,759 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 07:18:33,765 INFO repeater task os75nb_lastensq starting 11.8 seconds late 2018-03-01 07:18:35,717 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:18:35,717 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:18:35,717 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:18:12 2018-03-01 07:21:26,076 INFO repeater task os75nb_quick starting 4.4 seconds late 2018-03-01 07:21:28,267 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:21:28,267 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:21:28,267 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 07:21:28,610 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 07:23:13,840 INFO repeater task os75nb_3dayplots starting 2.2 seconds late 2018-03-01 07:23:18,737 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:23:18,737 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 07:23:23,744 INFO repeater task os75nb_lastensq starting 1.7 seconds late 2018-03-01 07:23:25,671 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:23:25,671 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 07:23:25,672 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:23:12 2018-03-01 07:26:36,038 INFO repeater task os75nb_quick starting 4.4 seconds late 2018-03-01 07:26:38,251 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:26:38,251 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:26:38,252 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 07:26:38,595 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 07:28:13,805 INFO repeater task os75nb_3dayplots starting 2.2 seconds late 2018-03-01 07:28:18,672 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:28:18,672 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 07:28:23,679 INFO repeater task os75nb_lastensq starting 1.7 seconds late 2018-03-01 07:28:25,642 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:28:25,643 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:28:25,643 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:28:12 2018-03-01 07:31:46,040 INFO repeater task os75nb_quick starting 4.4 seconds late 2018-03-01 07:31:48,216 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:31:48,216 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:31:48,216 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 07:31:48,547 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 07:33:13,735 INFO repeater task os75nb_3dayplots starting 2.1 seconds late 2018-03-01 07:33:18,520 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:33:18,520 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 07:33:18,520 INFO repeater task os75nb_tsstats starting 6.9 seconds late 2018-03-01 07:33:19,108 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 07:33:19,108 INFO repeater task os75nb_10pings starting 7.5 seconds late 2018-03-01 07:33:19,210 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 07:33:19,211 INFO repeater task os75nb_beamplots starting 7.6 seconds late 2018-03-01 07:33:20,201 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 07:33:20,201 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 07:33:20,201 INFO repeater task os75nb_beamplots starting 8.6 seconds late 2018-03-01 07:33:21,146 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 07:33:21,146 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 07:33:21,146 INFO repeater task posmv_hcorrstats starting 9.4 seconds late 2018-03-01 07:33:22,050 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 07:33:22,051 INFO repeater task posmv_plotposmv starting 10.3 seconds late 2018-03-01 07:33:25,036 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 07:33:25,037 INFO repeater task report_generator starting 13.2 seconds late 2018-03-01 07:33:28,883 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 165 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 165 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 07:33:28,883 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 07:33:33,889 INFO repeater task os75nb_lastensq starting 11.9 seconds late 2018-03-01 07:33:35,845 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:33:35,846 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:33:35,846 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:33:12 2018-03-01 07:36:56,261 INFO repeater task os75nb_quick starting 4.6 seconds late 2018-03-01 07:36:58,463 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:36:58,464 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:36:58,464 INFO repeater task os75nb_lastvec starting 6.8 seconds late 2018-03-01 07:36:58,830 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 07:38:13,986 INFO repeater task os75nb_3dayplots starting 2.3 seconds late 2018-03-01 07:38:18,760 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:38:18,760 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 07:38:23,768 INFO repeater task os75nb_lastensq starting 1.8 seconds late 2018-03-01 07:38:25,716 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:38:25,716 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 07:38:25,716 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:38:12 2018-03-01 07:42:06,122 INFO repeater task os75nb_quick starting 4.5 seconds late 2018-03-01 07:42:08,323 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:42:08,323 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:42:08,323 INFO repeater task os75nb_lastvec starting 6.7 seconds late 2018-03-01 07:42:08,696 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 07:43:13,795 INFO repeater task os75nb_3dayplots starting 2.2 seconds late 2018-03-01 07:43:18,630 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:43:18,630 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 07:43:23,636 INFO repeater task os75nb_lastensq starting 1.6 seconds late 2018-03-01 07:43:25,599 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:43:25,600 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:43:25,600 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:43:12 2018-03-01 07:47:16,094 INFO repeater task os75nb_quick starting 4.5 seconds late 2018-03-01 07:47:18,303 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:47:18,303 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:47:18,303 INFO repeater task os75nb_lastvec starting 6.7 seconds late 2018-03-01 07:47:18,655 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 07:48:13,770 INFO repeater task os75nb_3dayplots starting 2.1 seconds late 2018-03-01 07:48:18,735 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:48:18,735 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 07:48:18,736 INFO repeater task os75nb_tsstats starting 7.1 seconds late 2018-03-01 07:48:19,318 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 07:48:19,319 INFO repeater task os75nb_10pings starting 7.7 seconds late 2018-03-01 07:48:19,417 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 07:48:19,417 INFO repeater task os75nb_beamplots starting 7.8 seconds late 2018-03-01 07:48:20,407 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 07:48:20,407 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 07:48:20,407 INFO repeater task os75nb_beamplots starting 8.8 seconds late 2018-03-01 07:48:21,339 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 07:48:21,339 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 07:48:21,340 INFO repeater task posmv_hcorrstats starting 9.5 seconds late 2018-03-01 07:48:22,256 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 07:48:22,256 INFO repeater task posmv_plotposmv starting 10.5 seconds late 2018-03-01 07:48:25,222 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 07:48:25,222 INFO repeater task report_generator starting 13.4 seconds late 2018-03-01 07:48:29,089 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 165 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 165 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 07:48:29,089 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 07:48:34,095 INFO repeater task os75nb_lastensq starting 12.1 seconds late 2018-03-01 07:48:36,058 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:48:36,058 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:48:36,059 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:48:12 2018-03-01 07:52:26,484 INFO repeater task os75nb_quick starting 4.8 seconds late 2018-03-01 07:52:28,696 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:52:28,696 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:52:28,696 INFO repeater task os75nb_lastvec starting 7.1 seconds late 2018-03-01 07:52:29,056 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 07:53:14,146 INFO repeater task os75nb_3dayplots starting 2.5 seconds late 2018-03-01 07:53:19,016 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:53:19,016 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 07:53:24,019 INFO repeater task os75nb_lastensq starting 2.0 seconds late 2018-03-01 07:53:25,967 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:53:25,967 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 07:53:25,967 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:53:12 2018-03-01 07:57:36,477 INFO repeater task os75nb_quick starting 4.8 seconds late 2018-03-01 07:57:38,713 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 07:57:38,713 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 07:57:38,713 INFO repeater task os75nb_lastvec starting 7.1 seconds late 2018-03-01 07:57:39,074 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 07:58:14,137 INFO repeater task os75nb_3dayplots starting 2.5 seconds late 2018-03-01 07:58:18,946 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 07:58:18,947 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 07:58:23,954 INFO repeater task os75nb_lastensq starting 2.0 seconds late 2018-03-01 07:58:25,913 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 07:58:25,913 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 07:58:25,913 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 07:58:12 2018-03-01 08:02:46,460 INFO repeater task os75nb_quick starting 4.8 seconds late 2018-03-01 08:02:48,670 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:02:48,670 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:02:48,670 INFO repeater task os75nb_lastvec starting 7.0 seconds late 2018-03-01 08:02:49,034 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 08:03:14,078 INFO repeater task os75nb_3dayplots starting 2.4 seconds late 2018-03-01 08:03:18,982 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:03:18,982 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:03:18,982 INFO repeater task os75nb_tsstats starting 7.3 seconds late 2018-03-01 08:03:19,573 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 08:03:19,574 INFO repeater task os75nb_10pings starting 7.9 seconds late 2018-03-01 08:03:19,676 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 08:03:19,676 INFO repeater task os75nb_beamplots starting 8.0 seconds late 2018-03-01 08:03:20,686 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 08:03:20,686 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 08:03:20,686 INFO repeater task os75nb_beamplots starting 9.0 seconds late 2018-03-01 08:03:21,629 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 08:03:21,629 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 08:03:21,629 INFO repeater task posmv_hcorrstats starting 9.8 seconds late 2018-03-01 08:03:22,548 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 08:03:22,549 INFO repeater task posmv_plotposmv starting 10.8 seconds late 2018-03-01 08:03:25,458 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 08:03:25,458 INFO repeater task report_generator starting 13.7 seconds late 2018-03-01 08:03:29,321 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 08:03:29,321 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 08:03:34,327 INFO repeater task os75nb_lastensq starting 12.3 seconds late 2018-03-01 08:03:36,306 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:03:36,306 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 08:03:36,306 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:03:12 2018-03-01 08:07:51,770 INFO repeater task os75nb_quick starting 0.1 seconds late 2018-03-01 08:07:53,987 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:07:53,987 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:07:53,987 INFO repeater task os75nb_lastvec starting 2.4 seconds late 2018-03-01 08:07:54,342 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 08:08:14,383 INFO repeater task os75nb_3dayplots starting 2.7 seconds late 2018-03-01 08:08:19,255 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:08:19,255 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:08:24,262 INFO repeater task os75nb_lastensq starting 2.3 seconds late 2018-03-01 08:08:26,226 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:08:26,226 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 08:08:26,226 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:08:12 2018-03-01 08:13:01,806 INFO repeater task os75nb_quick starting 0.2 seconds late 2018-03-01 08:13:04,017 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:13:04,017 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:13:04,018 INFO repeater task os75nb_lastvec starting 2.4 seconds late 2018-03-01 08:13:04,389 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 08:13:14,409 INFO repeater task os75nb_3dayplots starting 2.8 seconds late 2018-03-01 08:13:19,271 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:13:19,271 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:13:24,279 INFO repeater task os75nb_lastensq starting 2.3 seconds late 2018-03-01 08:13:26,218 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:13:26,218 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 08:13:26,219 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:13:12 2018-03-01 08:18:11,774 INFO repeater task os75nb_quick starting 0.1 seconds late 2018-03-01 08:18:13,970 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:18:13,970 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:18:13,970 INFO repeater task os75nb_lastvec starting 2.3 seconds late 2018-03-01 08:18:14,311 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 08:18:14,312 INFO repeater task os75nb_3dayplots starting 2.7 seconds late 2018-03-01 08:18:19,217 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:18:19,217 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:18:19,218 INFO repeater task os75nb_tsstats starting 7.6 seconds late 2018-03-01 08:18:19,807 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 08:18:19,808 INFO repeater task os75nb_10pings starting 8.2 seconds late 2018-03-01 08:18:19,907 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 08:18:19,908 INFO repeater task os75nb_beamplots starting 8.3 seconds late 2018-03-01 08:18:20,898 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 08:18:20,898 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 08:18:20,899 INFO repeater task os75nb_beamplots starting 9.3 seconds late 2018-03-01 08:18:21,824 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 08:18:21,824 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 08:18:21,824 INFO repeater task posmv_hcorrstats starting 10.0 seconds late 2018-03-01 08:18:22,727 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 08:18:22,727 INFO repeater task posmv_plotposmv starting 10.9 seconds late 2018-03-01 08:18:25,657 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 08:18:25,658 INFO repeater task report_generator starting 13.9 seconds late 2018-03-01 08:18:29,496 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 08:18:29,496 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 08:18:34,502 INFO repeater task os75nb_lastensq starting 12.5 seconds late 2018-03-01 08:18:36,443 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:18:36,443 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 08:18:36,443 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:18:12 2018-03-01 08:23:12,030 INFO repeater task os75nb_3dayplots starting 0.4 seconds late 2018-03-01 08:23:16,976 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:23:16,976 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:23:21,984 INFO repeater task os75nb_quick starting 0.3 seconds late 2018-03-01 08:23:24,195 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:23:24,196 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:23:24,196 INFO repeater task os75nb_lastvec starting 2.6 seconds late 2018-03-01 08:23:24,556 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 08:23:29,563 INFO repeater task os75nb_lastensq starting 7.6 seconds late 2018-03-01 08:23:31,527 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:23:31,527 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 08:23:31,527 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:23:12 2018-03-01 08:28:12,066 INFO repeater task os75nb_3dayplots starting 0.4 seconds late 2018-03-01 08:28:16,982 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:28:16,982 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:28:27,000 INFO repeater task os75nb_lastensq starting 5.0 seconds late 2018-03-01 08:28:29,044 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:28:29,044 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 08:28:29,045 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:28:12 2018-03-01 08:28:34,053 INFO repeater task os75nb_quick starting 2.4 seconds late 2018-03-01 08:28:36,275 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:28:36,275 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:28:36,275 INFO repeater task os75nb_lastvec starting 4.6 seconds late 2018-03-01 08:28:36,631 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 08:33:12,201 INFO repeater task os75nb_3dayplots starting 0.6 seconds late 2018-03-01 08:33:17,127 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:33:17,128 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:33:17,128 INFO repeater task os75nb_tsstats starting 5.5 seconds late 2018-03-01 08:33:17,699 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 08:33:17,699 INFO repeater task os75nb_10pings starting 6.1 seconds late 2018-03-01 08:33:17,798 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 08:33:17,798 INFO repeater task os75nb_beamplots starting 6.2 seconds late 2018-03-01 08:33:18,773 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 08:33:18,773 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 08:33:18,774 INFO repeater task os75nb_beamplots starting 7.1 seconds late 2018-03-01 08:33:19,701 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 08:33:19,701 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 08:33:19,701 INFO repeater task posmv_hcorrstats starting 7.9 seconds late 2018-03-01 08:33:20,597 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 08:33:20,598 INFO repeater task posmv_plotposmv starting 8.8 seconds late 2018-03-01 08:33:23,535 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 08:33:23,536 INFO repeater task report_generator starting 11.7 seconds late 2018-03-01 08:33:27,402 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 08:33:27,402 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 08:33:32,408 INFO repeater task os75nb_lastensq starting 10.4 seconds late 2018-03-01 08:33:34,354 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:33:34,354 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 08:33:34,354 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:33:12 2018-03-01 08:33:44,368 INFO repeater task os75nb_quick starting 2.7 seconds late 2018-03-01 08:33:46,571 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:33:46,571 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:33:46,571 INFO repeater task os75nb_lastvec starting 4.9 seconds late 2018-03-01 08:33:46,909 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 08:38:12,465 INFO repeater task os75nb_3dayplots starting 0.8 seconds late 2018-03-01 08:38:17,438 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:38:17,439 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 08:38:22,442 INFO repeater task os75nb_lastensq starting 0.4 seconds late 2018-03-01 08:38:24,384 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:38:24,384 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 08:38:24,384 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:38:12 2018-03-01 08:38:54,451 INFO repeater task os75nb_quick starting 2.8 seconds late 2018-03-01 08:38:56,653 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:38:56,653 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:38:56,654 INFO repeater task os75nb_lastvec starting 5.0 seconds late 2018-03-01 08:38:56,994 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 08:43:12,477 INFO repeater task os75nb_3dayplots starting 0.8 seconds late 2018-03-01 08:43:17,407 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:43:17,407 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:43:22,414 INFO repeater task os75nb_lastensq starting 0.4 seconds late 2018-03-01 08:43:24,360 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:43:24,360 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 08:43:24,360 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:43:12 2018-03-01 08:44:04,447 INFO repeater task os75nb_quick starting 2.8 seconds late 2018-03-01 08:44:06,639 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:44:06,640 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:44:06,640 INFO repeater task os75nb_lastvec starting 5.0 seconds late 2018-03-01 08:44:06,981 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 08:48:12,502 INFO repeater task os75nb_3dayplots starting 0.9 seconds late 2018-03-01 08:48:17,433 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:48:17,433 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:48:17,433 INFO repeater task os75nb_tsstats starting 5.8 seconds late 2018-03-01 08:48:18,017 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 08:48:18,017 INFO repeater task os75nb_10pings starting 6.4 seconds late 2018-03-01 08:48:18,115 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 08:48:18,115 INFO repeater task os75nb_beamplots starting 6.5 seconds late 2018-03-01 08:48:19,106 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 08:48:19,106 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 08:48:19,106 INFO repeater task os75nb_beamplots starting 7.5 seconds late 2018-03-01 08:48:20,067 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 08:48:20,067 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 08:48:20,067 INFO repeater task posmv_hcorrstats starting 8.3 seconds late 2018-03-01 08:48:20,973 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 08:48:20,973 INFO repeater task posmv_plotposmv starting 9.2 seconds late 2018-03-01 08:48:23,942 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 08:48:23,942 INFO repeater task report_generator starting 12.1 seconds late 2018-03-01 08:48:27,789 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 08:48:27,789 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 08:48:32,792 INFO repeater task os75nb_lastensq starting 10.8 seconds late 2018-03-01 08:48:34,733 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:48:34,733 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 08:48:34,734 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:48:12 2018-03-01 08:49:14,818 INFO repeater task os75nb_quick starting 3.2 seconds late 2018-03-01 08:49:17,028 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:49:17,028 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:49:17,029 INFO repeater task os75nb_lastvec starting 5.4 seconds late 2018-03-01 08:49:17,373 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 08:53:12,861 INFO repeater task os75nb_3dayplots starting 1.2 seconds late 2018-03-01 08:53:17,811 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:53:17,811 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 08:53:22,818 INFO repeater task os75nb_lastensq starting 0.8 seconds late 2018-03-01 08:53:24,801 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:53:24,801 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 08:53:24,801 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:53:12 2018-03-01 08:54:24,932 INFO repeater task os75nb_quick starting 3.3 seconds late 2018-03-01 08:54:27,150 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:54:27,150 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:54:27,150 INFO repeater task os75nb_lastvec starting 5.5 seconds late 2018-03-01 08:54:27,503 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 08:58:12,940 INFO repeater task os75nb_3dayplots starting 1.3 seconds late