2018-03-01 08:58:17,881 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 08:58:17,882 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 08:58:22,888 INFO repeater task os75nb_lastensq starting 0.9 seconds late 2018-03-01 08:58:24,873 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 08:58:24,873 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 08:58:24,873 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 08:58:12 2018-03-01 08:59:35,014 INFO repeater task os75nb_quick starting 3.4 seconds late 2018-03-01 08:59:37,229 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 08:59:37,229 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 08:59:37,229 INFO repeater task os75nb_lastvec starting 5.6 seconds late 2018-03-01 08:59:37,602 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:03:12,986 INFO repeater task os75nb_3dayplots starting 1.3 seconds late 2018-03-01 09:03:17,857 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:03:17,857 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 09:03:17,857 INFO repeater task os75nb_tsstats starting 6.2 seconds late 2018-03-01 09:03:18,438 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 09:03:18,439 INFO repeater task os75nb_10pings starting 6.8 seconds late 2018-03-01 09:03:18,535 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 09:03:18,535 INFO repeater task os75nb_beamplots starting 6.9 seconds late 2018-03-01 09:03:19,503 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 09:03:19,503 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 09:03:19,503 INFO repeater task os75nb_beamplots starting 7.9 seconds late 2018-03-01 09:03:20,457 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 09:03:20,457 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 09:03:20,457 INFO repeater task posmv_hcorrstats starting 8.7 seconds late 2018-03-01 09:03:21,364 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 09:03:21,364 INFO repeater task posmv_plotposmv starting 9.6 seconds late 2018-03-01 09:03:24,387 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 09:03:24,388 INFO repeater task report_generator starting 12.6 seconds late 2018-03-01 09:03:28,248 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 09:03:28,248 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 09:03:33,250 INFO repeater task os75nb_lastensq starting 11.3 seconds late 2018-03-01 09:03:35,198 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:03:35,198 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 09:03:35,198 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:03:12 2018-03-01 09:04:45,335 INFO repeater task os75nb_quick starting 3.7 seconds late 2018-03-01 09:04:47,556 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:04:47,557 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:04:47,557 INFO repeater task os75nb_lastvec starting 5.9 seconds late 2018-03-01 09:04:47,926 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:08:13,344 INFO repeater task os75nb_3dayplots starting 1.7 seconds late 2018-03-01 09:08:18,319 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:08:18,319 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 09:08:23,327 INFO repeater task os75nb_lastensq starting 1.3 seconds late 2018-03-01 09:08:25,296 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:08:25,296 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:08:25,296 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:08:12 2018-03-01 09:09:55,494 INFO repeater task os75nb_quick starting 3.9 seconds late 2018-03-01 09:09:57,730 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:09:57,730 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:09:57,730 INFO repeater task os75nb_lastvec starting 6.1 seconds late 2018-03-01 09:09:58,098 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:13:13,501 INFO repeater task os75nb_3dayplots starting 1.9 seconds late 2018-03-01 09:13:18,441 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:13:18,441 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 09:13:23,448 INFO repeater task os75nb_lastensq starting 1.4 seconds late 2018-03-01 09:13:25,401 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:13:25,401 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:13:25,401 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:13:12 2018-03-01 09:15:05,613 INFO repeater task os75nb_quick starting 4.0 seconds late 2018-03-01 09:15:07,829 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:15:07,829 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:15:07,829 INFO repeater task os75nb_lastvec starting 6.2 seconds late 2018-03-01 09:15:08,198 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:18:13,545 INFO repeater task os75nb_3dayplots starting 1.9 seconds late 2018-03-01 09:18:18,473 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:18:18,473 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 09:18:18,473 INFO repeater task os75nb_tsstats starting 6.8 seconds late 2018-03-01 09:18:19,066 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:18:19,066 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 09:18:19,066 INFO repeater task os75nb_10pings starting 7.4 seconds late 2018-03-01 09:18:19,162 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 09:18:19,162 INFO repeater task os75nb_beamplots starting 7.5 seconds late 2018-03-01 09:18:20,147 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 09:18:20,148 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 09:18:20,148 INFO repeater task os75nb_beamplots starting 8.5 seconds late 2018-03-01 09:18:21,082 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 09:18:21,082 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 09:18:21,082 INFO repeater task posmv_hcorrstats starting 9.3 seconds late 2018-03-01 09:18:21,995 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 09:18:21,995 INFO repeater task posmv_plotposmv starting 10.2 seconds late 2018-03-01 09:18:24,993 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 09:18:24,993 INFO repeater task report_generator starting 13.2 seconds late 2018-03-01 09:18:28,844 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 09:18:28,844 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 09:18:33,850 INFO repeater task os75nb_lastensq starting 11.9 seconds late 2018-03-01 09:18:35,817 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:18:35,817 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:18:35,817 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:18:12 2018-03-01 09:20:16,016 INFO repeater task os75nb_quick starting 4.4 seconds late 2018-03-01 09:20:18,229 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:20:18,229 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:20:18,230 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 09:20:18,581 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:23:13,925 INFO repeater task os75nb_3dayplots starting 2.3 seconds late 2018-03-01 09:23:18,824 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:23:18,824 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 09:23:23,831 INFO repeater task os75nb_lastensq starting 1.8 seconds late 2018-03-01 09:23:25,792 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:23:25,792 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:23:25,792 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:23:12 2018-03-01 09:25:26,020 INFO repeater task os75nb_quick starting 4.4 seconds late 2018-03-01 09:25:28,243 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:25:28,244 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:25:28,244 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 09:25:28,596 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:28:13,927 INFO repeater task os75nb_3dayplots starting 2.3 seconds late 2018-03-01 09:28:18,765 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:28:18,765 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 09:28:23,772 INFO repeater task os75nb_lastensq starting 1.8 seconds late 2018-03-01 09:28:25,757 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:28:25,757 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:28:25,757 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:28:12 2018-03-01 09:30:36,019 INFO repeater task os75nb_quick starting 4.4 seconds late 2018-03-01 09:30:38,237 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:30:38,237 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:30:38,237 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 09:30:38,583 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 09:33:13,915 INFO repeater task os75nb_3dayplots starting 2.3 seconds late 2018-03-01 09:33:18,851 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:33:18,851 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 09:33:18,852 INFO repeater task os75nb_tsstats starting 7.2 seconds late 2018-03-01 09:33:19,442 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:33:19,442 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 09:33:19,442 INFO repeater task os75nb_10pings starting 7.8 seconds late 2018-03-01 09:33:19,539 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 09:33:19,539 INFO repeater task os75nb_beamplots starting 7.9 seconds late 2018-03-01 09:33:20,527 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 09:33:20,527 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 09:33:20,527 INFO repeater task os75nb_beamplots starting 8.9 seconds late 2018-03-01 09:33:21,458 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 09:33:21,458 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 09:33:21,458 INFO repeater task posmv_hcorrstats starting 9.7 seconds late 2018-03-01 09:33:22,371 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 09:33:22,371 INFO repeater task posmv_plotposmv starting 10.6 seconds late 2018-03-01 09:33:25,359 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 09:33:25,360 INFO repeater task report_generator starting 13.6 seconds late 2018-03-01 09:33:29,200 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 09:33:29,201 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 09:33:34,203 INFO repeater task os75nb_lastensq starting 12.2 seconds late 2018-03-01 09:33:36,137 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:33:36,137 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 09:33:36,137 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:33:12 2018-03-01 09:35:46,409 INFO repeater task os75nb_quick starting 4.8 seconds late 2018-03-01 09:35:48,608 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:35:48,608 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:35:48,608 INFO repeater task os75nb_lastvec starting 7.0 seconds late 2018-03-01 09:35:48,959 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:38:14,261 INFO repeater task os75nb_3dayplots starting 2.6 seconds late 2018-03-01 09:38:19,239 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:38:19,240 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 09:38:24,246 INFO repeater task os75nb_lastensq starting 2.2 seconds late 2018-03-01 09:38:26,249 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:38:26,249 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:38:26,249 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:38:12 2018-03-01 09:40:56,558 INFO repeater task os75nb_quick starting 4.9 seconds late 2018-03-01 09:40:58,785 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:40:58,785 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:40:58,785 INFO repeater task os75nb_lastvec starting 7.1 seconds late 2018-03-01 09:40:59,153 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:43:14,448 INFO repeater task os75nb_3dayplots starting 2.8 seconds late 2018-03-01 09:43:19,327 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:43:19,327 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 09:43:24,334 INFO repeater task os75nb_lastensq starting 2.3 seconds late 2018-03-01 09:43:26,338 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:43:26,338 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:43:26,339 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:43:12 2018-03-01 09:46:01,654 INFO repeater task os75nb_quick starting 0.0 seconds late 2018-03-01 09:46:03,857 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:46:03,857 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:46:03,857 INFO repeater task os75nb_lastvec starting 2.2 seconds late 2018-03-01 09:46:04,196 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 09:48:14,424 INFO repeater task os75nb_3dayplots starting 2.8 seconds late 2018-03-01 09:48:19,312 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:48:19,312 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 09:48:19,312 INFO repeater task os75nb_tsstats starting 7.7 seconds late 2018-03-01 09:48:19,908 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:48:19,909 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 09:48:19,909 INFO repeater task os75nb_10pings starting 8.3 seconds late 2018-03-01 09:48:20,007 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 09:48:20,007 INFO repeater task os75nb_beamplots starting 8.4 seconds late 2018-03-01 09:48:21,009 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 09:48:21,009 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 09:48:21,010 INFO repeater task os75nb_beamplots starting 9.4 seconds late 2018-03-01 09:48:21,950 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 09:48:21,951 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 09:48:21,951 INFO repeater task posmv_hcorrstats starting 10.2 seconds late 2018-03-01 09:48:22,873 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 09:48:22,874 INFO repeater task posmv_plotposmv starting 11.1 seconds late 2018-03-01 09:48:25,871 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 09:48:25,871 INFO repeater task report_generator starting 14.1 seconds late 2018-03-01 09:48:29,715 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 167 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 09:48:29,716 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 09:48:34,721 INFO repeater task os75nb_lastensq starting 12.7 seconds late 2018-03-01 09:48:36,690 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:48:36,690 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:48:36,691 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:48:12 2018-03-01 09:51:11,998 INFO repeater task os75nb_quick starting 0.4 seconds late 2018-03-01 09:51:14,204 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:51:14,204 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:51:14,204 INFO repeater task os75nb_lastvec starting 2.6 seconds late 2018-03-01 09:51:14,543 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 09:53:14,757 INFO repeater task os75nb_3dayplots starting 3.1 seconds late 2018-03-01 09:53:19,739 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:53:19,739 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 09:53:24,746 INFO repeater task os75nb_lastensq starting 2.7 seconds late 2018-03-01 09:53:26,706 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:53:26,706 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:53:26,707 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:53:12 2018-03-01 09:56:22,061 INFO repeater task os75nb_quick starting 0.4 seconds late 2018-03-01 09:56:24,275 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 09:56:24,275 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 09:56:24,275 INFO repeater task os75nb_lastvec starting 2.6 seconds late 2018-03-01 09:56:24,641 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 09:58:14,869 INFO repeater task os75nb_3dayplots starting 3.2 seconds late 2018-03-01 09:58:19,824 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 09:58:19,824 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 09:58:24,831 INFO repeater task os75nb_lastensq starting 2.8 seconds late 2018-03-01 09:58:26,784 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 09:58:26,784 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 09:58:26,784 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 09:58:12 2018-03-01 10:01:32,162 INFO repeater task os75nb_quick starting 0.5 seconds late 2018-03-01 10:01:34,366 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:01:34,366 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:01:34,366 INFO repeater task os75nb_lastvec starting 2.7 seconds late 2018-03-01 10:01:34,719 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 10:03:14,926 INFO repeater task os75nb_3dayplots starting 3.3 seconds late 2018-03-01 10:03:19,747 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:03:19,747 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 10:03:19,747 INFO repeater task os75nb_tsstats starting 8.1 seconds late 2018-03-01 10:03:20,331 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:03:20,331 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 10:03:20,331 INFO repeater task os75nb_10pings starting 8.7 seconds late 2018-03-01 10:03:20,436 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 10:03:20,436 INFO repeater task os75nb_beamplots starting 8.8 seconds late 2018-03-01 10:03:21,443 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 10:03:21,443 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 10:03:21,443 INFO repeater task os75nb_beamplots starting 9.8 seconds late 2018-03-01 10:03:22,365 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 10:03:22,365 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 10:03:22,366 INFO repeater task posmv_hcorrstats starting 10.6 seconds late 2018-03-01 10:03:23,288 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 10:03:23,288 INFO repeater task posmv_plotposmv starting 11.5 seconds late 2018-03-01 10:03:26,190 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 10:03:26,190 INFO repeater task report_generator starting 14.4 seconds late 2018-03-01 10:03:30,030 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 170 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 170 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 10:03:30,030 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 10:03:35,035 INFO repeater task os75nb_lastensq starting 13.0 seconds late 2018-03-01 10:03:37,006 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:03:37,006 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 10:03:37,007 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:03:12 2018-03-01 10:06:42,408 INFO repeater task os75nb_quick starting 0.8 seconds late 2018-03-01 10:06:44,639 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:06:44,639 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:06:44,639 INFO repeater task os75nb_lastvec starting 3.0 seconds late 2018-03-01 10:06:44,997 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 10:08:15,159 INFO repeater task os75nb_3dayplots starting 3.5 seconds late 2018-03-01 10:08:20,062 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:08:20,062 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 10:08:25,069 INFO repeater task os75nb_lastensq starting 3.1 seconds late 2018-03-01 10:08:27,120 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:08:27,120 INFO repeater task os75nb_lastensq ended after 2.1 seconds 2018-03-01 10:08:27,120 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:08:12 2018-03-01 10:11:52,536 INFO repeater task os75nb_quick starting 0.9 seconds late 2018-03-01 10:11:54,804 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:11:54,805 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 10:11:54,805 INFO repeater task os75nb_lastvec starting 3.2 seconds late 2018-03-01 10:11:55,185 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 10:13:15,353 INFO repeater task os75nb_3dayplots starting 3.7 seconds late 2018-03-01 10:13:20,239 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:13:20,239 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 10:13:25,246 INFO repeater task os75nb_lastensq starting 3.2 seconds late 2018-03-01 10:13:27,213 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:13:27,214 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 10:13:27,214 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:13:12 2018-03-01 10:17:02,645 INFO repeater task os75nb_quick starting 1.0 seconds late 2018-03-01 10:17:04,882 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:17:04,882 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:17:04,882 INFO repeater task os75nb_lastvec starting 3.2 seconds late 2018-03-01 10:17:05,240 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 10:18:15,382 INFO repeater task os75nb_3dayplots starting 3.7 seconds late 2018-03-01 10:18:20,160 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:18:20,160 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 10:18:20,161 INFO repeater task os75nb_tsstats starting 8.5 seconds late 2018-03-01 10:18:20,754 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:18:20,754 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 10:18:20,754 INFO repeater task os75nb_10pings starting 9.1 seconds late 2018-03-01 10:18:20,854 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 10:18:20,854 INFO repeater task os75nb_beamplots starting 9.2 seconds late 2018-03-01 10:18:21,840 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 10:18:21,841 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 10:18:21,841 INFO repeater task os75nb_beamplots starting 10.2 seconds late 2018-03-01 10:18:22,787 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 10:18:22,787 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 10:18:22,787 INFO repeater task posmv_hcorrstats starting 11.0 seconds late 2018-03-01 10:18:23,682 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 10:18:23,683 INFO repeater task posmv_plotposmv starting 11.9 seconds late 2018-03-01 10:18:26,578 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 10:18:26,579 INFO repeater task report_generator starting 14.8 seconds late 2018-03-01 10:18:30,422 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 170 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 170 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 10:18:30,422 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 10:18:35,428 INFO repeater task os75nb_lastensq starting 13.4 seconds late 2018-03-01 10:18:37,407 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:18:37,407 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 10:18:37,407 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:18:12 2018-03-01 10:22:12,880 INFO repeater task os75nb_quick starting 1.2 seconds late 2018-03-01 10:22:15,091 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:22:15,092 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:22:15,092 INFO repeater task os75nb_lastvec starting 3.5 seconds late 2018-03-01 10:22:15,438 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 10:23:15,539 INFO repeater task os75nb_3dayplots starting 3.9 seconds late 2018-03-01 10:23:20,414 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:23:20,414 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 10:23:25,421 INFO repeater task os75nb_lastensq starting 3.4 seconds late 2018-03-01 10:23:27,372 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:23:27,373 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 10:23:27,373 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:23:12 2018-03-01 10:27:22,829 INFO repeater task os75nb_quick starting 1.2 seconds late 2018-03-01 10:27:25,049 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:27:25,049 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:27:25,049 INFO repeater task os75nb_lastvec starting 3.4 seconds late 2018-03-01 10:27:25,389 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 10:28:15,494 INFO repeater task os75nb_3dayplots starting 3.9 seconds late 2018-03-01 10:28:20,368 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:28:20,368 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 10:28:25,375 INFO repeater task os75nb_lastensq starting 3.4 seconds late 2018-03-01 10:28:27,369 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:28:27,370 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 10:28:27,370 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:28:12 2018-03-01 10:32:32,815 INFO repeater task os75nb_quick starting 1.2 seconds late 2018-03-01 10:32:35,028 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:32:35,028 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:32:35,028 INFO repeater task os75nb_lastvec starting 3.4 seconds late 2018-03-01 10:32:35,367 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 10:33:15,441 INFO repeater task os75nb_3dayplots starting 3.8 seconds late 2018-03-01 10:33:20,353 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:33:20,353 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 10:33:20,353 INFO repeater task os75nb_tsstats starting 8.7 seconds late 2018-03-01 10:33:20,955 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:33:20,955 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 10:33:20,955 INFO repeater task os75nb_10pings starting 9.3 seconds late 2018-03-01 10:33:21,055 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 10:33:21,055 INFO repeater task os75nb_beamplots starting 9.4 seconds late 2018-03-01 10:33:22,037 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 10:33:22,037 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 10:33:22,037 INFO repeater task os75nb_beamplots starting 10.4 seconds late 2018-03-01 10:33:22,985 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 10:33:22,986 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 10:33:22,986 INFO repeater task posmv_hcorrstats starting 11.2 seconds late 2018-03-01 10:33:23,893 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 10:33:23,893 INFO repeater task posmv_plotposmv starting 12.1 seconds late 2018-03-01 10:33:26,846 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 10:33:26,846 INFO repeater task report_generator starting 15.0 seconds late 2018-03-01 10:33:30,703 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 170 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 170 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 10:33:30,703 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 10:33:35,709 INFO repeater task os75nb_lastensq starting 13.7 seconds late 2018-03-01 10:33:37,661 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:33:37,661 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 10:33:37,661 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:33:12 2018-03-01 10:37:43,170 INFO repeater task os75nb_quick starting 1.5 seconds late 2018-03-01 10:37:45,382 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:37:45,383 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:37:45,383 INFO repeater task os75nb_lastvec starting 3.7 seconds late 2018-03-01 10:37:45,737 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 10:38:15,802 INFO repeater task os75nb_3dayplots starting 4.2 seconds late 2018-03-01 10:38:20,719 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:38:20,719 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 10:38:25,726 INFO repeater task os75nb_lastensq starting 3.7 seconds late 2018-03-01 10:38:27,669 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:38:27,670 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 10:38:27,670 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:38:12 2018-03-01 10:42:53,159 INFO repeater task os75nb_quick starting 1.5 seconds late 2018-03-01 10:42:55,380 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:42:55,380 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:42:55,381 INFO repeater task os75nb_lastvec starting 3.7 seconds late 2018-03-01 10:42:55,742 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 10:43:15,778 INFO repeater task os75nb_3dayplots starting 4.1 seconds late 2018-03-01 10:43:20,675 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:43:20,675 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 10:43:25,682 INFO repeater task os75nb_lastensq starting 3.7 seconds late 2018-03-01 10:43:27,631 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:43:27,631 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 10:43:27,631 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 10:43:12 2018-03-01 10:48:03,204 INFO repeater task os75nb_quick starting 1.6 seconds late 2018-03-01 10:48:05,425 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 10:48:05,425 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 10:48:05,425 INFO repeater task os75nb_lastvec starting 3.8 seconds late 2018-03-01 10:48:05,783 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 10:48:15,802 INFO repeater task os75nb_3dayplots starting 4.2 seconds late 2018-03-01 10:48:20,628 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 10:48:20,629 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 10:48:20,629 INFO repeater task os75nb_tsstats starting 9.0 seconds late 2018-03-01 10:48:21,228 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 10:48:21,228 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 10:48:21,229 INFO repeater task os75nb_10pings starting 9.6 seconds late 2018-03-01 10:48:21,328 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 10:48:21,329 INFO repeater task os75nb_beamplots starting 9.7 seconds late 2018-03-01 10:48:22,319 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 10:48:22,319 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 10:48:22,319 INFO repeater task os75nb_beamplots starting 10.7 seconds late 2018-03-01 10:48:23,253 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 10:48:23,253 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 10:48:23,253 INFO repeater task posmv_hcorrstats starting 11.5 seconds late 2018-03-01 10:48:24,177 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 10:48:24,177 INFO repeater task posmv_plotposmv starting 12.4 seconds late 2018-03-01 10:48:27,158 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 10:48:27,158 INFO repeater task report_generator starting 15.4 seconds late 2018-03-01 10:48:30,995 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 170 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 170 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 10:48:30,996 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 10:48:35,999 INFO repeater task os75nb_lastensq starting 14.0 seconds late