2018-03-01 12:48:30,955 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 12:48:30,956 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 12:48:35,962 INFO repeater task os75nb_lastensq starting 14.0 seconds late 2018-03-01 12:48:37,927 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 12:48:37,927 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 12:48:37,927 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 12:48:12 2018-03-01 12:52:03,362 INFO repeater task os75nb_quick starting 1.7 seconds late 2018-03-01 12:52:05,577 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 12:52:05,577 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 12:52:05,578 INFO repeater task os75nb_lastvec starting 3.9 seconds late 2018-03-01 12:52:05,941 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 12:53:16,080 INFO repeater task os75nb_3dayplots starting 4.4 seconds late 2018-03-01 12:53:20,943 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 12:53:20,943 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 12:53:25,950 INFO repeater task os75nb_lastensq starting 4.0 seconds late 2018-03-01 12:53:27,887 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 12:53:27,887 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 12:53:27,887 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 12:53:12 2018-03-01 12:57:13,306 INFO repeater task os75nb_quick starting 1.7 seconds late 2018-03-01 12:57:15,508 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 12:57:15,508 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 12:57:15,508 INFO repeater task os75nb_lastvec starting 3.9 seconds late 2018-03-01 12:57:15,867 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 12:58:15,962 INFO repeater task os75nb_3dayplots starting 4.3 seconds late 2018-03-01 12:58:20,829 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 12:58:20,830 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 12:58:25,836 INFO repeater task os75nb_lastensq starting 3.8 seconds late 2018-03-01 12:58:27,791 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 12:58:27,791 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 12:58:27,792 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 12:58:12 2018-03-01 13:02:23,296 INFO repeater task os75nb_quick starting 1.7 seconds late 2018-03-01 13:02:25,500 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:02:25,500 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:02:25,501 INFO repeater task os75nb_lastvec starting 3.9 seconds late 2018-03-01 13:02:25,863 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:03:15,970 INFO repeater task os75nb_3dayplots starting 4.3 seconds late 2018-03-01 13:03:20,874 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:03:20,874 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 13:03:20,874 INFO repeater task os75nb_tsstats starting 9.2 seconds late 2018-03-01 13:03:21,477 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:03:21,477 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 13:03:21,477 INFO repeater task os75nb_10pings starting 9.8 seconds late 2018-03-01 13:03:21,581 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 13:03:21,581 INFO repeater task os75nb_beamplots starting 9.9 seconds late 2018-03-01 13:03:22,567 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 13:03:22,567 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 13:03:22,567 INFO repeater task os75nb_beamplots starting 10.9 seconds late 2018-03-01 13:03:23,521 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 13:03:23,521 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 13:03:23,521 INFO repeater task posmv_hcorrstats starting 11.7 seconds late 2018-03-01 13:03:24,394 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 13:03:24,394 INFO repeater task posmv_plotposmv starting 12.6 seconds late 2018-03-01 13:03:27,455 INFO repeater task posmv_plotposmv ended after 3.1 seconds 2018-03-01 13:03:27,455 INFO repeater task report_generator starting 15.7 seconds late 2018-03-01 13:03:31,275 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 13:03:31,275 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 13:03:36,281 INFO repeater task os75nb_lastensq starting 14.3 seconds late 2018-03-01 13:03:38,237 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:03:38,237 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:03:38,237 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:03:12 2018-03-01 13:07:33,716 INFO repeater task os75nb_quick starting 2.1 seconds late 2018-03-01 13:07:35,943 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:07:35,944 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:07:35,944 INFO repeater task os75nb_lastvec starting 4.3 seconds late 2018-03-01 13:07:36,320 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:08:16,406 INFO repeater task os75nb_3dayplots starting 4.8 seconds late 2018-03-01 13:08:21,332 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:08:21,332 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 13:08:26,339 INFO repeater task os75nb_lastensq starting 4.3 seconds late 2018-03-01 13:08:28,333 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:08:28,333 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:08:28,333 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:08:12 2018-03-01 13:12:43,791 INFO repeater task os75nb_quick starting 2.2 seconds late 2018-03-01 13:12:46,037 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:12:46,038 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:12:46,038 INFO repeater task os75nb_lastvec starting 4.4 seconds late 2018-03-01 13:12:46,414 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:13:16,481 INFO repeater task os75nb_3dayplots starting 4.8 seconds late 2018-03-01 13:13:21,378 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:13:21,378 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 13:13:26,385 INFO repeater task os75nb_lastensq starting 4.4 seconds late 2018-03-01 13:13:28,357 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:13:28,357 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:13:28,358 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:13:12 2018-03-01 13:17:53,868 INFO repeater task os75nb_quick starting 2.2 seconds late 2018-03-01 13:17:56,075 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:17:56,076 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:17:56,076 INFO repeater task os75nb_lastvec starting 4.4 seconds late 2018-03-01 13:17:56,465 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:18:16,504 INFO repeater task os75nb_3dayplots starting 4.9 seconds late 2018-03-01 13:18:21,458 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:18:21,458 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 13:18:21,459 INFO repeater task os75nb_tsstats starting 9.8 seconds late 2018-03-01 13:18:22,076 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:18:22,076 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 13:18:22,076 INFO repeater task os75nb_10pings starting 10.4 seconds late 2018-03-01 13:18:22,172 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 13:18:22,172 INFO repeater task os75nb_beamplots starting 10.5 seconds late 2018-03-01 13:18:23,124 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 13:18:23,125 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 13:18:23,125 INFO repeater task os75nb_beamplots starting 11.5 seconds late 2018-03-01 13:18:24,099 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 13:18:24,099 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 13:18:24,099 INFO repeater task posmv_hcorrstats starting 12.3 seconds late 2018-03-01 13:18:24,971 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 13:18:24,971 INFO repeater task posmv_plotposmv starting 13.2 seconds late 2018-03-01 13:18:27,984 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 13:18:27,984 INFO repeater task report_generator starting 16.2 seconds late 2018-03-01 13:18:31,846 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 13:18:31,846 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 13:18:36,852 INFO repeater task os75nb_lastensq starting 14.9 seconds late 2018-03-01 13:18:38,807 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:18:38,807 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:18:38,807 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:18:12 2018-03-01 13:23:04,377 INFO repeater task os75nb_quick starting 2.7 seconds late 2018-03-01 13:23:06,604 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:23:06,604 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:23:06,605 INFO repeater task os75nb_lastvec starting 5.0 seconds late 2018-03-01 13:23:06,962 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:23:11,970 INFO repeater task os75nb_3dayplots starting 0.3 seconds late 2018-03-01 13:23:16,872 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:23:16,873 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 13:23:26,891 INFO repeater task os75nb_lastensq starting 4.9 seconds late 2018-03-01 13:23:28,865 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:23:28,866 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:23:28,866 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:23:12 2018-03-01 13:28:14,500 INFO repeater task os75nb_quick starting 2.9 seconds late 2018-03-01 13:28:16,708 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:28:16,708 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:28:16,708 INFO repeater task os75nb_lastvec starting 5.1 seconds late 2018-03-01 13:28:17,070 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:28:17,071 INFO repeater task os75nb_3dayplots starting 5.4 seconds late 2018-03-01 13:28:22,028 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:28:22,028 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 13:28:27,034 INFO repeater task os75nb_lastensq starting 5.0 seconds late 2018-03-01 13:28:29,007 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:28:29,007 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:28:29,007 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:28:12 2018-03-01 13:33:14,557 INFO repeater task os75nb_3dayplots starting 2.9 seconds late 2018-03-01 13:33:19,468 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:33:19,468 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 13:33:19,469 INFO repeater task os75nb_tsstats starting 7.8 seconds late 2018-03-01 13:33:20,096 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:33:20,096 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 13:33:20,097 INFO repeater task os75nb_10pings starting 8.5 seconds late 2018-03-01 13:33:20,202 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 13:33:20,202 INFO repeater task os75nb_beamplots starting 8.6 seconds late 2018-03-01 13:33:21,190 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 13:33:21,190 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 13:33:21,191 INFO repeater task os75nb_beamplots starting 9.6 seconds late 2018-03-01 13:33:22,175 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 13:33:22,175 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 13:33:22,176 INFO repeater task posmv_hcorrstats starting 10.4 seconds late 2018-03-01 13:33:23,067 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 13:33:23,067 INFO repeater task posmv_plotposmv starting 11.3 seconds late 2018-03-01 13:33:26,061 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 13:33:26,061 INFO repeater task report_generator starting 14.3 seconds late 2018-03-01 13:33:29,909 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 13:33:29,909 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 13:33:34,915 INFO repeater task os75nb_lastensq starting 12.9 seconds late 2018-03-01 13:33:36,864 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:33:36,864 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 13:33:36,864 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:33:12 2018-03-01 13:33:36,865 INFO repeater task os75nb_quick starting 15.2 seconds late 2018-03-01 13:33:39,086 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:33:39,086 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:33:39,086 INFO repeater task os75nb_lastvec starting 17.5 seconds late 2018-03-01 13:33:39,463 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:38:15,055 INFO repeater task os75nb_3dayplots starting 3.4 seconds late 2018-03-01 13:38:19,976 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:38:19,977 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 13:38:24,984 INFO repeater task os75nb_lastensq starting 3.0 seconds late 2018-03-01 13:38:26,951 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:38:26,951 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:38:26,952 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:38:12 2018-03-01 13:38:31,959 INFO repeater task os75nb_quick starting 0.3 seconds late 2018-03-01 13:38:34,178 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:38:34,179 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:38:34,179 INFO repeater task os75nb_lastvec starting 2.5 seconds late 2018-03-01 13:38:34,540 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:43:15,120 INFO repeater task os75nb_3dayplots starting 3.5 seconds late 2018-03-01 13:43:20,143 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:43:20,143 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 13:43:25,150 INFO repeater task os75nb_lastensq starting 3.2 seconds late 2018-03-01 13:43:27,113 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:43:27,113 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:43:27,113 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:43:12 2018-03-01 13:43:42,148 INFO repeater task os75nb_quick starting 0.5 seconds late 2018-03-01 13:43:44,430 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:43:44,431 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 13:43:44,431 INFO repeater task os75nb_lastvec starting 2.8 seconds late 2018-03-01 13:43:44,790 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:48:15,278 INFO repeater task os75nb_3dayplots starting 3.6 seconds late 2018-03-01 13:48:20,177 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:48:20,177 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 13:48:20,177 INFO repeater task os75nb_tsstats starting 8.5 seconds late 2018-03-01 13:48:20,771 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:48:20,771 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 13:48:20,771 INFO repeater task os75nb_10pings starting 9.1 seconds late 2018-03-01 13:48:20,868 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 13:48:20,869 INFO repeater task os75nb_beamplots starting 9.2 seconds late 2018-03-01 13:48:21,852 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 13:48:21,852 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 13:48:21,852 INFO repeater task os75nb_beamplots starting 10.2 seconds late 2018-03-01 13:48:22,799 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 13:48:22,799 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 13:48:22,800 INFO repeater task posmv_hcorrstats starting 11.0 seconds late 2018-03-01 13:48:23,703 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 13:48:23,703 INFO repeater task posmv_plotposmv starting 11.9 seconds late 2018-03-01 13:48:26,711 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 13:48:26,711 INFO repeater task report_generator starting 14.9 seconds late 2018-03-01 13:48:30,579 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 172 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 13:48:30,579 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 13:48:35,585 INFO repeater task os75nb_lastensq starting 13.6 seconds late 2018-03-01 13:48:37,566 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:48:37,566 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:48:37,566 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:48:12 2018-03-01 13:48:52,597 INFO repeater task os75nb_quick starting 1.0 seconds late 2018-03-01 13:48:54,831 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:48:54,831 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:48:54,831 INFO repeater task os75nb_lastvec starting 3.2 seconds late 2018-03-01 13:48:55,208 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:53:15,740 INFO repeater task os75nb_3dayplots starting 4.1 seconds late 2018-03-01 13:53:20,707 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:53:20,708 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 13:53:25,711 INFO repeater task os75nb_lastensq starting 3.7 seconds late 2018-03-01 13:53:27,667 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:53:27,667 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 13:53:27,667 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:53:12 2018-03-01 13:54:02,737 INFO repeater task os75nb_quick starting 1.1 seconds late 2018-03-01 13:54:05,009 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:54:05,009 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 13:54:05,009 INFO repeater task os75nb_lastvec starting 3.4 seconds late 2018-03-01 13:54:05,393 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 13:58:15,916 INFO repeater task os75nb_3dayplots starting 4.3 seconds late 2018-03-01 13:58:20,769 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 13:58:20,769 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 13:58:25,776 INFO repeater task os75nb_lastensq starting 3.8 seconds late 2018-03-01 13:58:27,719 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 13:58:27,719 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 13:58:27,720 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 13:58:12 2018-03-01 13:59:12,805 INFO repeater task os75nb_quick starting 1.2 seconds late 2018-03-01 13:59:15,050 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 13:59:15,050 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 13:59:15,051 INFO repeater task os75nb_lastvec starting 3.4 seconds late 2018-03-01 13:59:15,426 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:03:15,923 INFO repeater task os75nb_3dayplots starting 4.3 seconds late 2018-03-01 14:03:20,857 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:03:20,857 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 14:03:20,858 INFO repeater task os75nb_tsstats starting 9.2 seconds late 2018-03-01 14:03:21,438 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:03:21,438 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 14:03:21,439 INFO repeater task os75nb_10pings starting 9.8 seconds late 2018-03-01 14:03:21,540 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 14:03:21,540 INFO repeater task os75nb_beamplots starting 9.9 seconds late 2018-03-01 14:03:22,540 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 14:03:22,540 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 14:03:22,540 INFO repeater task os75nb_beamplots starting 10.9 seconds late 2018-03-01 14:03:23,481 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 14:03:23,481 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 14:03:23,482 INFO repeater task posmv_hcorrstats starting 11.7 seconds late 2018-03-01 14:03:24,425 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 14:03:24,425 INFO repeater task posmv_plotposmv starting 12.6 seconds late 2018-03-01 14:03:27,331 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 14:03:27,331 INFO repeater task report_generator starting 15.5 seconds late 2018-03-01 14:03:31,164 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 14:03:31,165 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 14:03:36,171 INFO repeater task os75nb_lastensq starting 14.2 seconds late 2018-03-01 14:03:38,130 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:03:38,130 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 14:03:38,130 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:03:12 2018-03-01 14:04:23,203 INFO repeater task os75nb_quick starting 1.6 seconds late 2018-03-01 14:04:25,436 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:04:25,436 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 14:04:25,436 INFO repeater task os75nb_lastvec starting 3.8 seconds late 2018-03-01 14:04:25,796 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:08:16,269 INFO repeater task os75nb_3dayplots starting 4.6 seconds late 2018-03-01 14:08:21,238 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:08:21,238 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 14:08:26,245 INFO repeater task os75nb_lastensq starting 4.2 seconds late 2018-03-01 14:08:28,204 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:08:28,204 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 14:08:28,204 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:08:12 2018-03-01 14:09:33,342 INFO repeater task os75nb_quick starting 1.7 seconds late 2018-03-01 14:09:35,575 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:09:35,575 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 14:09:35,576 INFO repeater task os75nb_lastvec starting 3.9 seconds late 2018-03-01 14:09:35,927 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:13:16,336 INFO repeater task os75nb_3dayplots starting 4.7 seconds late 2018-03-01 14:13:21,260 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:13:21,260 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 14:13:26,267 INFO repeater task os75nb_lastensq starting 4.3 seconds late 2018-03-01 14:13:28,233 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:13:28,233 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 14:13:28,234 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:13:12 2018-03-01 14:14:43,396 INFO repeater task os75nb_quick starting 1.8 seconds late 2018-03-01 14:14:45,645 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:14:45,645 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 14:14:45,645 INFO repeater task os75nb_lastvec starting 4.0 seconds late 2018-03-01 14:14:46,006 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:18:16,423 INFO repeater task os75nb_3dayplots starting 4.8 seconds late 2018-03-01 14:18:21,200 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:18:21,200 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 14:18:21,200 INFO repeater task os75nb_tsstats starting 9.6 seconds late 2018-03-01 14:18:21,791 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:18:21,791 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 14:18:21,792 INFO repeater task os75nb_10pings starting 10.2 seconds late 2018-03-01 14:18:21,897 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 14:18:21,897 INFO repeater task os75nb_beamplots starting 10.3 seconds late 2018-03-01 14:18:22,891 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 14:18:22,892 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 14:18:22,892 INFO repeater task os75nb_beamplots starting 11.3 seconds late 2018-03-01 14:18:23,824 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 14:18:23,824 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 14:18:23,824 INFO repeater task posmv_hcorrstats starting 12.0 seconds late 2018-03-01 14:18:24,746 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 14:18:24,746 INFO repeater task posmv_plotposmv starting 12.9 seconds late 2018-03-01 14:18:27,672 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 14:18:27,672 INFO repeater task report_generator starting 15.9 seconds late 2018-03-01 14:18:31,515 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 14:18:31,515 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 14:18:36,519 INFO repeater task os75nb_lastensq starting 14.5 seconds late 2018-03-01 14:18:38,493 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:18:38,493 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 14:18:38,493 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:18:12 2018-03-01 14:19:53,646 INFO repeater task os75nb_quick starting 2.0 seconds late 2018-03-01 14:19:55,886 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:19:55,886 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 14:19:55,887 INFO repeater task os75nb_lastvec starting 4.3 seconds late 2018-03-01 14:19:56,255 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:23:11,669 INFO repeater task os75nb_3dayplots starting 0.0 seconds late 2018-03-01 14:23:16,511 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:23:16,511 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 14:23:26,530 INFO repeater task os75nb_lastensq starting 4.5 seconds late 2018-03-01 14:23:28,472 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:23:28,472 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 14:23:28,472 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:23:12 2018-03-01 14:25:03,677 INFO repeater task os75nb_quick starting 2.0 seconds late 2018-03-01 14:25:05,914 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:25:05,914 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 14:25:05,914 INFO repeater task os75nb_lastvec starting 4.3 seconds late 2018-03-01 14:25:06,280 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:28:11,646 INFO repeater task os75nb_3dayplots starting 0.0 seconds late 2018-03-01 14:28:16,587 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:28:16,587 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 14:28:26,605 INFO repeater task os75nb_lastensq starting 4.6 seconds late 2018-03-01 14:28:28,533 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:28:28,533 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 14:28:28,534 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:28:12 2018-03-01 14:30:13,753 INFO repeater task os75nb_quick starting 2.1 seconds late 2018-03-01 14:30:16,002 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:30:16,002 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 14:30:16,003 INFO repeater task os75nb_lastvec starting 4.4 seconds late 2018-03-01 14:30:16,371 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:33:11,738 INFO repeater task os75nb_3dayplots starting 0.1 seconds late 2018-03-01 14:33:16,698 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:33:16,698 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 14:33:16,698 INFO repeater task os75nb_tsstats starting 5.1 seconds late 2018-03-01 14:33:17,296 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:33:17,297 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 14:33:17,297 INFO repeater task os75nb_10pings starting 5.7 seconds late 2018-03-01 14:33:17,394 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 14:33:17,394 INFO repeater task os75nb_beamplots starting 5.8 seconds late 2018-03-01 14:33:18,368 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 14:33:18,368 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 14:33:18,368 INFO repeater task os75nb_beamplots starting 6.7 seconds late 2018-03-01 14:33:19,333 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 14:33:19,333 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 14:33:19,333 INFO repeater task posmv_hcorrstats starting 7.5 seconds late 2018-03-01 14:33:20,224 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 14:33:20,225 INFO repeater task posmv_plotposmv starting 8.4 seconds late 2018-03-01 14:33:23,198 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 14:33:23,198 INFO repeater task report_generator starting 11.4 seconds late 2018-03-01 14:33:27,028 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 14:33:27,029 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 14:33:32,031 INFO repeater task os75nb_lastensq starting 10.0 seconds late 2018-03-01 14:33:33,973 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:33:33,973 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 14:33:33,973 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:33:12 2018-03-01 14:35:24,202 INFO repeater task os75nb_quick starting 2.6 seconds late 2018-03-01 14:35:26,437 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:35:26,437 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 14:35:26,437 INFO repeater task os75nb_lastvec starting 4.8 seconds late 2018-03-01 14:35:26,785 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 14:38:12,126 INFO repeater task os75nb_3dayplots starting 0.5 seconds late 2018-03-01 14:38:17,051 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:38:17,052 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 14:38:22,058 INFO repeater task os75nb_lastensq starting 0.1 seconds late 2018-03-01 14:38:24,024 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:38:24,024 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 14:38:24,024 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:38:12 2018-03-01 14:40:34,296 INFO repeater task os75nb_quick starting 2.7 seconds late 2018-03-01 14:40:36,564 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:40:36,565 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 14:40:36,565 INFO repeater task os75nb_lastvec starting 4.9 seconds late 2018-03-01 14:40:36,918 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:43:12,220 INFO repeater task os75nb_3dayplots starting 0.6 seconds late 2018-03-01 14:43:17,209 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:43:17,209 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 14:43:22,216 INFO repeater task os75nb_lastensq starting 0.2 seconds late 2018-03-01 14:43:24,173 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:43:24,173 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 14:43:24,173 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:43:12 2018-03-01 14:45:44,477 INFO repeater task os75nb_quick starting 2.8 seconds late 2018-03-01 14:45:46,722 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:45:46,722 INFO repeater task os75nb_quick ended after 2.2 seconds