2018-03-01 14:45:46,722 INFO repeater task os75nb_lastvec starting 5.1 seconds late 2018-03-01 14:45:47,072 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 14:48:12,348 INFO repeater task os75nb_3dayplots starting 0.7 seconds late 2018-03-01 14:48:17,299 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:48:17,299 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 14:48:17,299 INFO repeater task os75nb_tsstats starting 5.7 seconds late 2018-03-01 14:48:17,894 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:48:17,894 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 14:48:17,895 INFO repeater task os75nb_10pings starting 6.3 seconds late 2018-03-01 14:48:17,994 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 14:48:17,994 INFO repeater task os75nb_beamplots starting 6.4 seconds late 2018-03-01 14:48:18,993 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 14:48:18,993 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 14:48:18,994 INFO repeater task os75nb_beamplots starting 7.4 seconds late 2018-03-01 14:48:19,917 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 14:48:19,917 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 14:48:19,917 INFO repeater task posmv_hcorrstats starting 8.1 seconds late 2018-03-01 14:48:20,829 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 14:48:20,829 INFO repeater task posmv_plotposmv starting 9.0 seconds late 2018-03-01 14:48:23,786 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 14:48:23,787 INFO repeater task report_generator starting 12.0 seconds late 2018-03-01 14:48:27,641 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 14:48:27,641 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 14:48:32,647 INFO repeater task os75nb_lastensq starting 10.6 seconds late 2018-03-01 14:48:34,607 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:48:34,607 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 14:48:34,607 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:48:12 2018-03-01 14:50:54,875 INFO repeater task os75nb_quick starting 3.2 seconds late 2018-03-01 14:50:57,147 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:50:57,147 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 14:50:57,148 INFO repeater task os75nb_lastvec starting 5.5 seconds late 2018-03-01 14:50:57,510 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:53:12,798 INFO repeater task os75nb_3dayplots starting 1.2 seconds late 2018-03-01 14:53:17,620 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:53:17,620 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 14:53:22,626 INFO repeater task os75nb_lastensq starting 0.6 seconds late 2018-03-01 14:53:24,564 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:53:24,565 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 14:53:24,565 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:53:12 2018-03-01 14:56:04,898 INFO repeater task os75nb_quick starting 3.3 seconds late 2018-03-01 14:56:07,143 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 14:56:07,143 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 14:56:07,144 INFO repeater task os75nb_lastvec starting 5.5 seconds late 2018-03-01 14:56:07,510 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 14:58:12,783 INFO repeater task os75nb_3dayplots starting 1.1 seconds late 2018-03-01 14:58:17,770 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 14:58:17,770 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 14:58:22,777 INFO repeater task os75nb_lastensq starting 0.8 seconds late 2018-03-01 14:58:24,721 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 14:58:24,722 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 14:58:24,722 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 14:58:12 2018-03-01 15:01:15,059 INFO repeater task os75nb_quick starting 3.4 seconds late 2018-03-01 15:01:17,291 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:01:17,291 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:01:17,291 INFO repeater task os75nb_lastvec starting 5.7 seconds late 2018-03-01 15:01:17,655 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 15:03:12,880 INFO repeater task os75nb_3dayplots starting 1.2 seconds late 2018-03-01 15:03:17,833 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:03:17,834 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 15:03:17,834 INFO repeater task os75nb_tsstats starting 6.2 seconds late 2018-03-01 15:03:18,426 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:03:18,426 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 15:03:18,426 INFO repeater task os75nb_10pings starting 6.8 seconds late 2018-03-01 15:03:18,528 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 15:03:18,528 INFO repeater task os75nb_beamplots starting 6.9 seconds late 2018-03-01 15:03:19,516 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 15:03:19,516 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 15:03:19,516 INFO repeater task os75nb_beamplots starting 7.9 seconds late 2018-03-01 15:03:20,463 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 15:03:20,463 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 15:03:20,463 INFO repeater task posmv_hcorrstats starting 8.7 seconds late 2018-03-01 15:03:21,389 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 15:03:21,390 INFO repeater task posmv_plotposmv starting 9.6 seconds late 2018-03-01 15:03:24,380 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 15:03:24,380 INFO repeater task report_generator starting 12.6 seconds late 2018-03-01 15:03:28,220 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 15:03:28,220 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 15:03:33,226 INFO repeater task os75nb_lastensq starting 11.2 seconds late 2018-03-01 15:03:35,199 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:03:35,199 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 15:03:35,199 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:03:12 2018-03-01 15:06:25,566 INFO repeater task os75nb_quick starting 3.9 seconds late 2018-03-01 15:06:27,804 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:06:27,804 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:06:27,804 INFO repeater task os75nb_lastvec starting 6.2 seconds late 2018-03-01 15:06:28,140 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 15:08:13,349 INFO repeater task os75nb_3dayplots starting 1.7 seconds late 2018-03-01 15:08:18,290 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:08:18,290 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:08:23,293 INFO repeater task os75nb_lastensq starting 1.3 seconds late 2018-03-01 15:08:25,221 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:08:25,222 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 15:08:25,222 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:08:12 2018-03-01 15:11:35,590 INFO repeater task os75nb_quick starting 4.0 seconds late 2018-03-01 15:11:37,822 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:11:37,822 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:11:37,822 INFO repeater task os75nb_lastvec starting 6.2 seconds late 2018-03-01 15:11:38,161 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 15:13:13,359 INFO repeater task os75nb_3dayplots starting 1.7 seconds late 2018-03-01 15:13:18,225 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:13:18,225 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:13:23,232 INFO repeater task os75nb_lastensq starting 1.2 seconds late 2018-03-01 15:13:25,161 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:13:25,161 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 15:13:25,162 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:13:12 2018-03-01 15:16:45,526 INFO repeater task os75nb_quick starting 3.9 seconds late 2018-03-01 15:16:47,743 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:16:47,744 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:16:47,744 INFO repeater task os75nb_lastvec starting 6.1 seconds late 2018-03-01 15:16:48,081 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 15:18:13,236 INFO repeater task os75nb_3dayplots starting 1.6 seconds late 2018-03-01 15:18:18,185 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:18:18,185 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:18:18,185 INFO repeater task os75nb_tsstats starting 6.5 seconds late 2018-03-01 15:18:18,775 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:18:18,776 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 15:18:18,776 INFO repeater task os75nb_10pings starting 7.1 seconds late 2018-03-01 15:18:18,880 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 15:18:18,880 INFO repeater task os75nb_beamplots starting 7.2 seconds late 2018-03-01 15:18:19,880 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 15:18:19,881 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 15:18:19,881 INFO repeater task os75nb_beamplots starting 8.2 seconds late 2018-03-01 15:18:20,816 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 15:18:20,816 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 15:18:20,816 INFO repeater task posmv_hcorrstats starting 9.0 seconds late 2018-03-01 15:18:21,741 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 15:18:21,741 INFO repeater task posmv_plotposmv starting 9.9 seconds late 2018-03-01 15:18:24,738 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 15:18:24,739 INFO repeater task report_generator starting 12.9 seconds late 2018-03-01 15:18:28,589 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 15:18:28,589 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 15:18:33,595 INFO repeater task os75nb_lastensq starting 11.6 seconds late 2018-03-01 15:18:35,539 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:18:35,539 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 15:18:35,539 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:18:12 2018-03-01 15:21:55,942 INFO repeater task os75nb_quick starting 4.3 seconds late 2018-03-01 15:21:58,189 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:21:58,189 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:21:58,189 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 15:21:58,544 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 15:23:13,677 INFO repeater task os75nb_3dayplots starting 2.0 seconds late 2018-03-01 15:23:18,585 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:23:18,586 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:23:23,592 INFO repeater task os75nb_lastensq starting 1.6 seconds late 2018-03-01 15:23:25,551 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:23:25,552 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 15:23:25,552 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:23:12 2018-03-01 15:27:06,005 INFO repeater task os75nb_quick starting 4.4 seconds late 2018-03-01 15:27:08,221 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:27:08,222 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:27:08,222 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 15:27:08,573 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 15:28:13,710 INFO repeater task os75nb_3dayplots starting 2.1 seconds late 2018-03-01 15:28:18,595 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:28:18,595 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:28:23,598 INFO repeater task os75nb_lastensq starting 1.6 seconds late 2018-03-01 15:28:25,584 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:28:25,585 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 15:28:25,585 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:28:12 2018-03-01 15:32:16,040 INFO repeater task os75nb_quick starting 4.4 seconds late 2018-03-01 15:32:18,271 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:32:18,271 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:32:18,271 INFO repeater task os75nb_lastvec starting 6.6 seconds late 2018-03-01 15:32:18,621 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 15:33:13,730 INFO repeater task os75nb_3dayplots starting 2.1 seconds late 2018-03-01 15:33:18,665 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:33:18,665 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:33:18,666 INFO repeater task os75nb_tsstats starting 7.0 seconds late 2018-03-01 15:33:19,262 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:33:19,262 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 15:33:19,262 INFO repeater task os75nb_10pings starting 7.6 seconds late 2018-03-01 15:33:19,364 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 15:33:19,364 INFO repeater task os75nb_beamplots starting 7.7 seconds late 2018-03-01 15:33:20,362 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 15:33:20,362 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 15:33:20,363 INFO repeater task os75nb_beamplots starting 8.7 seconds late 2018-03-01 15:33:21,296 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 15:33:21,296 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 15:33:21,297 INFO repeater task posmv_hcorrstats starting 9.5 seconds late 2018-03-01 15:33:22,218 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 15:33:22,218 INFO repeater task posmv_plotposmv starting 10.4 seconds late 2018-03-01 15:33:25,205 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 15:33:25,205 INFO repeater task report_generator starting 13.4 seconds late 2018-03-01 15:33:29,030 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 15:33:29,030 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 15:33:34,033 INFO repeater task os75nb_lastensq starting 12.0 seconds late 2018-03-01 15:33:36,005 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:33:36,005 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 15:33:36,006 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:33:12 2018-03-01 15:37:26,490 INFO repeater task os75nb_quick starting 4.9 seconds late 2018-03-01 15:37:28,720 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:37:28,720 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:37:28,720 INFO repeater task os75nb_lastvec starting 7.1 seconds late 2018-03-01 15:37:29,082 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 15:38:14,176 INFO repeater task os75nb_3dayplots starting 2.5 seconds late 2018-03-01 15:38:19,113 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:38:19,113 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:38:24,120 INFO repeater task os75nb_lastensq starting 2.1 seconds late 2018-03-01 15:38:26,073 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:38:26,073 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 15:38:26,073 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:38:12 2018-03-01 15:42:36,536 INFO repeater task os75nb_quick starting 4.9 seconds late 2018-03-01 15:42:38,789 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:42:38,790 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 15:42:38,790 INFO repeater task os75nb_lastvec starting 7.2 seconds late 2018-03-01 15:42:39,144 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 15:43:14,221 INFO repeater task os75nb_3dayplots starting 2.6 seconds late 2018-03-01 15:43:19,097 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:43:19,097 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:43:24,104 INFO repeater task os75nb_lastensq starting 2.1 seconds late 2018-03-01 15:43:26,043 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:43:26,043 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 15:43:26,044 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:43:12 2018-03-01 15:47:46,591 INFO repeater task os75nb_quick starting 5.0 seconds late 2018-03-01 15:47:48,849 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:47:48,849 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 15:47:48,849 INFO repeater task os75nb_lastvec starting 7.2 seconds late 2018-03-01 15:47:49,197 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 15:48:14,251 INFO repeater task os75nb_3dayplots starting 2.6 seconds late 2018-03-01 15:48:19,185 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:48:19,186 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:48:19,186 INFO repeater task os75nb_tsstats starting 7.5 seconds late 2018-03-01 15:48:19,798 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:48:19,799 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 15:48:19,799 INFO repeater task os75nb_10pings starting 8.2 seconds late 2018-03-01 15:48:19,900 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 15:48:19,900 INFO repeater task os75nb_beamplots starting 8.3 seconds late 2018-03-01 15:48:20,880 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 15:48:20,880 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 15:48:20,880 INFO repeater task os75nb_beamplots starting 9.2 seconds late 2018-03-01 15:48:21,828 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 15:48:21,828 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 15:48:21,828 INFO repeater task posmv_hcorrstats starting 10.0 seconds late 2018-03-01 15:48:22,749 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 15:48:22,749 INFO repeater task posmv_plotposmv starting 11.0 seconds late 2018-03-01 15:48:25,746 INFO repeater task posmv_plotposmv ended after 3.0 seconds 2018-03-01 15:48:25,747 INFO repeater task report_generator starting 14.0 seconds late 2018-03-01 15:48:29,581 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 175 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 15:48:29,582 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 15:48:34,587 INFO repeater task os75nb_lastensq starting 12.6 seconds late 2018-03-01 15:48:36,549 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:48:36,549 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 15:48:36,549 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:48:12 2018-03-01 15:52:52,024 INFO repeater task os75nb_quick starting 0.4 seconds late 2018-03-01 15:52:54,279 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:52:54,279 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 15:52:54,280 INFO repeater task os75nb_lastvec starting 2.6 seconds late 2018-03-01 15:52:54,633 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 15:53:14,676 INFO repeater task os75nb_3dayplots starting 3.0 seconds late 2018-03-01 15:53:19,592 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:53:19,593 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 15:53:24,599 INFO repeater task os75nb_lastensq starting 2.6 seconds late 2018-03-01 15:53:26,552 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:53:26,552 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 15:53:26,552 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:53:12 2018-03-01 15:58:02,121 INFO repeater task os75nb_quick starting 0.5 seconds late 2018-03-01 15:58:04,366 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 15:58:04,366 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 15:58:04,367 INFO repeater task os75nb_lastvec starting 2.7 seconds late 2018-03-01 15:58:04,722 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 15:58:14,743 INFO repeater task os75nb_3dayplots starting 3.1 seconds late 2018-03-01 15:58:19,736 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 15:58:19,736 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 15:58:24,743 INFO repeater task os75nb_lastensq starting 2.7 seconds late 2018-03-01 15:58:26,699 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 15:58:26,700 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 15:58:26,700 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 15:58:12 2018-03-01 16:03:12,339 INFO repeater task os75nb_quick starting 0.7 seconds late 2018-03-01 16:03:14,580 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 16:03:14,580 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 16:03:14,581 INFO repeater task os75nb_lastvec starting 2.9 seconds late 2018-03-01 16:03:14,937 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 16:03:14,937 INFO repeater task os75nb_3dayplots starting 3.3 seconds late 2018-03-01 16:03:19,864 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 16:03:19,864 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 16:03:19,864 INFO repeater task os75nb_tsstats starting 8.2 seconds late 2018-03-01 16:03:20,477 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:03:20,478 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 16:03:20,478 INFO repeater task os75nb_10pings starting 8.8 seconds late 2018-03-01 16:03:20,583 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 16:03:20,583 INFO repeater task os75nb_beamplots starting 8.9 seconds late 2018-03-01 16:03:21,566 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 16:03:21,567 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 16:03:21,567 INFO repeater task os75nb_beamplots starting 9.9 seconds late 2018-03-01 16:03:22,524 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 16:03:22,524 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 16:03:22,524 INFO repeater task posmv_hcorrstats starting 10.7 seconds late 2018-03-01 16:03:23,419 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 16:03:23,419 INFO repeater task posmv_plotposmv starting 11.6 seconds late 2018-03-01 16:03:26,330 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 16:03:26,331 INFO repeater task report_generator starting 14.5 seconds late 2018-03-01 16:03:30,194 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 177 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 177 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 16:03:30,194 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 16:03:35,200 INFO repeater task os75nb_lastensq starting 13.2 seconds late 2018-03-01 16:03:37,156 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:03:37,156 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 16:03:37,157 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 16:03:12 2018-03-01 16:08:12,660 INFO repeater task os75nb_3dayplots starting 1.0 seconds late 2018-03-01 16:08:17,610 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 16:08:17,610 INFO repeater task os75nb_3dayplots ended after 5.0 seconds 2018-03-01 16:08:22,616 INFO repeater task os75nb_lastensq starting 0.6 seconds late 2018-03-01 16:08:24,548 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:08:24,548 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 16:08:24,548 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 16:08:12 2018-03-01 16:08:24,549 INFO repeater task os75nb_quick starting 2.9 seconds late 2018-03-01 16:08:26,776 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 16:08:26,777 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 16:08:26,777 INFO repeater task os75nb_lastvec starting 5.1 seconds late 2018-03-01 16:08:27,124 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 16:13:12,733 INFO repeater task os75nb_3dayplots starting 1.1 seconds late 2018-03-01 16:13:17,661 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 16:13:17,661 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 16:13:22,668 INFO repeater task os75nb_lastensq starting 0.7 seconds late 2018-03-01 16:13:24,615 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:13:24,616 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 16:13:24,616 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 16:13:12 2018-03-01 16:13:34,635 INFO repeater task os75nb_quick starting 3.0 seconds late 2018-03-01 16:13:36,875 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 16:13:36,876 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 16:13:36,876 INFO repeater task os75nb_lastvec starting 5.2 seconds late 2018-03-01 16:13:37,220 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 16:18:12,738 INFO repeater task os75nb_3dayplots starting 1.1 seconds late 2018-03-01 16:18:17,659 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 16:18:17,659 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 16:18:17,659 INFO repeater task os75nb_tsstats starting 6.0 seconds late 2018-03-01 16:18:18,260 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:18:18,260 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 16:18:18,261 INFO repeater task os75nb_10pings starting 6.6 seconds late 2018-03-01 16:18:18,362 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 16:18:18,363 INFO repeater task os75nb_beamplots starting 6.7 seconds late 2018-03-01 16:18:19,378 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 16:18:19,379 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 16:18:19,379 INFO repeater task os75nb_beamplots starting 7.7 seconds late 2018-03-01 16:18:20,301 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 16:18:20,301 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 16:18:20,301 INFO repeater task posmv_hcorrstats starting 8.5 seconds late 2018-03-01 16:18:21,199 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 16:18:21,199 INFO repeater task posmv_plotposmv starting 9.4 seconds late 2018-03-01 16:18:24,106 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 16:18:24,107 INFO repeater task report_generator starting 12.3 seconds late 2018-03-01 16:18:27,964 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 177 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 177 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 16:18:27,965 INFO repeater task report_generator ended after 3.9 seconds 2018-03-01 16:18:32,971 INFO repeater task os75nb_lastensq starting 11.0 seconds late 2018-03-01 16:18:34,940 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:18:34,941 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 16:18:34,941 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 16:18:12 2018-03-01 16:18:44,959 INFO repeater task os75nb_quick starting 3.3 seconds late 2018-03-01 16:18:47,250 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 16:18:47,250 INFO repeater task os75nb_quick ended after 2.3 seconds 2018-03-01 16:18:47,251 INFO repeater task os75nb_lastvec starting 5.6 seconds late 2018-03-01 16:18:47,589 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 16:23:13,091 INFO repeater task os75nb_3dayplots starting 1.5 seconds late 2018-03-01 16:23:18,013 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 16:23:18,013 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 16:23:23,018 INFO repeater task os75nb_lastensq starting 1.0 seconds late 2018-03-01 16:23:24,972 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:23:24,972 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 16:23:24,972 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 16:23:12 2018-03-01 16:23:55,031 INFO repeater task os75nb_quick starting 3.4 seconds late 2018-03-01 16:23:57,272 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 16:23:57,272 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 16:23:57,273 INFO repeater task os75nb_lastvec starting 5.6 seconds late 2018-03-01 16:23:57,610 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 16:28:13,083 INFO repeater task os75nb_3dayplots starting 1.4 seconds late 2018-03-01 16:28:17,952 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 16:28:17,952 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 16:28:22,959 INFO repeater task os75nb_lastensq starting 1.0 seconds late 2018-03-01 16:28:24,892 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:28:24,893 INFO repeater task os75nb_lastensq ended after 1.9 seconds 2018-03-01 16:28:24,893 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 16:28:12 2018-03-01 16:29:04,975 INFO repeater task os75nb_quick starting 3.3 seconds late 2018-03-01 16:29:07,212 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 16:29:07,213 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 16:29:07,213 INFO repeater task os75nb_lastvec starting 5.6 seconds late 2018-03-01 16:29:07,556 INFO repeater task os75nb_lastvec ended after 0.3 seconds 2018-03-01 16:33:13,039 INFO repeater task os75nb_3dayplots starting 1.4 seconds late 2018-03-01 16:33:17,912 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 16:33:17,912 INFO repeater task os75nb_3dayplots ended after 4.9 seconds 2018-03-01 16:33:17,912 INFO repeater task os75nb_tsstats starting 6.3 seconds late 2018-03-01 16:33:18,495 INFO repeater task os75nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:33:18,495 INFO repeater task os75nb_tsstats ended after 0.6 seconds 2018-03-01 16:33:18,495 INFO repeater task os75nb_10pings starting 6.9 seconds late 2018-03-01 16:33:18,594 INFO repeater task os75nb_10pings ended after 0.1 seconds 2018-03-01 16:33:18,594 INFO repeater task os75nb_beamplots starting 7.0 seconds late 2018-03-01 16:33:19,571 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 16:33:19,571 INFO repeater task os75nb_beamplots ended after 1.0 seconds 2018-03-01 16:33:19,571 INFO repeater task os75nb_beamplots starting 7.9 seconds late 2018-03-01 16:33:20,504 INFO repeater task os75nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2018-03-01 16:33:20,504 INFO repeater task os75nb_beamplots ended after 0.9 seconds 2018-03-01 16:33:20,504 INFO repeater task posmv_hcorrstats starting 8.7 seconds late 2018-03-01 16:33:21,382 INFO repeater task posmv_hcorrstats ended after 0.9 seconds 2018-03-01 16:33:21,382 INFO repeater task posmv_plotposmv starting 9.6 seconds late 2018-03-01 16:33:24,330 INFO repeater task posmv_plotposmv ended after 2.9 seconds 2018-03-01 16:33:24,330 INFO repeater task report_generator starting 12.5 seconds late 2018-03-01 16:33:28,177 INFO repeater task report_generator output: cruisename is cruisename is report_dir is report_dir is uhdas_dir is uhdas_dir is 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 0.0 sec : initial png rsync 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 1.0 sec : navplot: plot_rnav.py -s300 --noshow --title RB1801_C --outfile /home/data/RB1801_C/reports/nav_plot_all /home/data/RB1801_C/rbin/gpsnav/*.gps.rbin 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_topo.png /home/data/RB1801_C/reports/nav_plot_all_topoT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : navplot: convert -resize 200 /home/data/RB1801_C/reports/nav_plot_all_txy.png /home/data/RB1801_C/reports/nav_plot_all_txyT.png 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75nb/png_archive/ /home/data/RB1801_C/reports/os75nb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : png_archive: rsync -a /home/data/RB1801_C/proc/os75bb/png_archive/ /home/data/RB1801_C/reports/os75bb_pngarchive 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : uhdas_overview: uhdas_info.py --overview --logfile /home/data/RB1801_C/reports/uhdas_overview.txt /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : sonar_summary: sonar_summary.py --outfile /home/data/RB1801_C/reports/sonar_summary.txt --uhdas_dir /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_settings: uhdas_info.py --settings --logfile /home/data/RB1801_C/reports/ADCP_settings.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 0.0 sec : adcp_cals: uhdas_info.py --cals --logfile /home/data/RB1801_C/reports/ADCP_cals.txt /home/data/RB1801_C 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75nb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75nb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : ens_hcorr: plot_enshcorr.py --infile /home/data/RB1801_C/proc/os75bb/cal/rotate/ens_hcorr.asc --outfile /home/data/RB1801_C/reports/os75bb_hcorr --yearbase 2018 --titlestring ens_hcorr_pmv 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 177 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 1.0 sec : hcorr_serial_plot: plot_posmv.py --cutoff 0.020 -s 177 -o /home/data/RB1801_C/reports/posmv_quality --noshow /home/data/RB1801_C 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_proc.py /home/data/RB1801_C/reports/RB1801_C_proc.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 0.0 sec : pycfg: cp -p /home/data/RB1801_C/raw/config/RB1801_C_sensor.py /home/data/RB1801_C/reports/RB1801_C_sensor.py.txt 4.0 seconds elapsed 4.0 seconds elapsed html page starts here: /home/data/RB1801_C/reports/index.html html page starts here: /home/data/RB1801_C/reports/index.html 2018-03-01 16:33:28,177 INFO repeater task report_generator ended after 3.8 seconds 2018-03-01 16:33:33,183 INFO repeater task os75nb_lastensq starting 11.2 seconds late 2018-03-01 16:33:35,134 INFO repeater task os75nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:4139: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2018-03-01 16:33:35,134 INFO repeater task os75nb_lastensq ended after 2.0 seconds 2018-03-01 16:33:35,134 INFO repeater task os75nb_lastensq: Time from /home/data/RB1801_C/proc/os75nb/load/wrote_ens_time: 2018/03/01 16:33:12 2018-03-01 16:34:15,213 INFO repeater task os75nb_quick starting 3.6 seconds late 2018-03-01 16:34:17,442 INFO repeater task os75nb_quick output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:59: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2018-03-01 16:34:17,442 INFO repeater task os75nb_quick ended after 2.2 seconds 2018-03-01 16:34:17,442 INFO repeater task os75nb_lastvec starting 5.8 seconds late 2018-03-01 16:34:17,796 INFO repeater task os75nb_lastvec ended after 0.4 seconds 2018-03-01 16:38:13,260 INFO repeater task os75nb_3dayplots starting 1.6 seconds late 2018-03-01 16:38:18,108 INFO repeater task os75nb_3dayplots output: zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked zgrid failed zgrid failed: returning all values masked 2018-03-01 16:38:18,108 INFO repeater task os75nb_3dayplots ended after 4.8 seconds 2018-03-01 16:38:23,113 INFO repeater task os75nb_lastensq starting 1.1 seconds late