ctdcal - AOML/PhOD CTDO2 Calibration Toolbox Path -> /doris/snowden/devel/ctdcal apply_calibration - Apply oxygen and conductivity calibration . calibration_cond - Main conductivity calibration calling routine. calibration_oxygen - Main oxygen calibration calling routine. cnv_get - Retrieve a data column from cnv structure by SBE name compare_cond - Diagnostics plots to compare CTD and samples conductivity values. compare_oxy - Diagnostics plots to compare CTD and samples dissolved oxygen values. correct_autosal_drift - Correct for autosal drift with pre/post standard water analyses count_lines - Count the number of lines in an ascii file. ctdcal - AOML PhOD CTDO2 calibration toolbox ddeblank - Double deblank. Strip both leading and trailing blanks. ddewhite - Double dewhite. Strip both leading and trailing whitespace. dewhite - Dewhite. Strip trailing whitespace. eval_fit - functiontemplate - One line description. group_name - Get the preference group name for a given cruiseid. load_bl - Read and save the SeaBird ASCII .BL file format load_btl - Read and save the SeaBird ASCII .BTL file format load_cnv - Load the informationin the *.cnv files into the cruise database load_cond_db - Load conductivity data from the given cruise database. load_oxy - Load a *.oxy files from the AOML Winkler titration system. load_salts - Load the autosal samples into the cruise database. make_cond_sumfile - Makes conductivity bottle/ctd comparison summary file. make_cruise_dir - Setup a new working directory for CTD calibration. make_fit_cond - [newbotco,newctdco]=make_fit_cond(X,sta,cprs,botc,stddev,fit,plottitle,h_color); make_mfile_docs - Regenerate the documentation for the ctdcal mfiles.. make_oxy_sumfile - Makes oxygen bottle/ctd comparison summary file. make_oxy_sumfile_deep - Makes oxygen bottle/ctd comparison summary file. make_oxy_sumfile_shallow - Makes oxygen bottle/ctd comparison summary file. match_autosal_raw_dat - Match the samples from the *.dat with the raw values in *.raw nan_mean - isempty(x) % Check for empty input. nan_std - mean non_lin_fit - Nonlinear least-squares data fitting by the Gauss-Newton method. ox_units - converts between 3 different oxygen units oxy_fit_exp - (No help available) oxy_fit_linear - (No help available) oxy_fit_none - (No help available) oxy_fit_poly2 - (No help available) oxy_fit_poly3 - (No help available) oxy_fit_poly4 - (No help available) oxy_fit_poly5 - (No help available) oxy_fit_poly6 - (No help available) oxy_struct - Return an empty oxygen calibration struct with minimum required fields oxygen_fit_exp - to calculate the dissolved oxygen oxygen_fit_linear - to calculate the dissolved oxygen oxygen_fit_none - to calculate the dissolved oxygen oxygen_fit_poly2 - to calculate the dissolved oxygen oxygen_fit_poly3 - to calculate the dissolved oxygen oxygen_fit_poly4 - to calculate the dissolved oxygen oxygen_fit_poly5 - to calculate the dissolved oxygen oxygen_fit_poly6 - to calculate the dissolved oxygen plot_fit - (No help available) read_autosal_dat - Read the *.dat files from the NOAA Ship Ron Brown autosal system. read_autosal_raw - Read the data in the *.raw files from the Ron Brown read_oxy - Load a *.oxy file from the AOML Winkler titration system. read_sbeasc - Reads the SeaBird *.asc file format and pairs data with a hdr_struct read_sbebl - Reads the SeaBird ASCII .BL file format read_sbebtl - Reads the SeaBird ASCII .BTL file format read_sbecnv - Reads the SeaBird BINARY or ASCII *.cnv file format read_sbehdr - Reads the SeaBird *.hdr file format sample_struct - Return an empty data structure with the minimum required fields save_fit - (No help available) splitcnv - Split a cnv structure into upcast/downcast stats_fit - some statistics strjoin - Join strings in a cell array. substr - Extract a substring out of a string. update_calibration_data - Copy new data filesfrom source_dir into the calibration_dir weim - Running weighted average of input data given a window window - Return a window of a given shape for smoothing data. write_to_logfile - One line description. demos/load_salts_ab0409 - Load the autosal samples into the cruise database. demos/load_salts_stc02 - Load the autosal samples into the cruise database. demos/read_autosal_dat_ab0409 - Read the wward3 *.dat files demos/read_autosal_dat_stc02 - Read the stc02 *n.txt files demos/read_autosal_dat_wward3 - Read the wward3 *.dat files demos/register_cruise - Input and manage cruise meta-data prior to calibration. demos/stc02_devel_log - Sandbox/scratch test script for ctdcal devel demos/update_calibration_data - Copy new data filesfrom source_dir into the calibration_dir old/bl2mat - Reads the SeaBird ASCII .BL file format old/btl2mat - Reads the SeaBird ASCII .BTL file format old/btl2mat_ab - Reads the SeaBird ASCII .BTL file format old/cnv2mat - Reads the SeaBird BINARY or ASCII.CNV file format old/cnv2mat_ab - Reads the SeaBird BINARY or ASCII.CNV file format old/compare_cond - Diagnostics plots to compare CTD and samples conductivity values. old/correct_autosal_ab0409 - value for the conductivity ratio old/load_bl - Read and save the SeaBird ASCII .BL file format old/make_cond_sum - Makes conductivity bottle/ctd comparison summary file. old/master_btl_file - Create a master bottle file from the .bot files in a given directory.