AOML's Ocean Chemistry and Ecosystems Division


Scientific Publications

by

Ocean Chemistry and Ecosystems Division personnel

 

Papers: 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 2004 2003 2002 2001 2000 1999

2014

Cannizzaro, J.P., C. Hu, K.L. Carder, C.R. Kelble, N. Melo, E.M. Johns, G.A. Vargo, and C.A. Heil. On the accuracy of SeaWiFS ocean color data products on the West Florida Shelf. Journal of Coastal Research, 29(6):1257-1272 (doi:10.2112/JCOASTRES-D-12-00223.1) (2013).

Ebentier, D.L., K.T. Hanley, Y. Cao, B.D. Badgley, A.B. Boehm, J.S. Ervin, K.D. Goodwin, M. Gourmelon, J.F. Griffith, P.A. Holden, C.A. Kelty, S. Lozach, C. McGee, L.A. Peed, M. Raith, H. Ryu, M.J. Sadowsky, E.A. Scott, J. Santo Domingo, A. Schriewer, C.D. Sinigalliano, O.C. Shanks, L.C. Van De Werfhorst, D. Wang, S. Wuertz, and J.A. Jay. Evaluation of the repeatability and reproducibility of a suite of qPCR-based microbial source tracking methods. Water Research, 47(18):6839-6848 (doi:10.1016/j.watres.2013.01.060) (2013).

Kearney, K.A., C. Stock, and J.L. Sarmiento. Amplification and attenuation of increased primary production in a marine food web. Marine Ecology Progress Series, 491:1-14 (doi:10.3354/meps10484) (2013).

Layton, B.A., Y. Cao, D.L. Ebentier, K. Hanley, E. Balleste, J. Brandao, M. Byappanahalli, R. Converse, A.H. Farnleitner, J. Gentry-Shields, M.L. Gidley, M. Gourmelon, C.S. Lee, J. Lee, S. Lozach, T. Madi, W.G. Meijer, R. Noble, L. Peed, G.H. Reischer, R. Rodrigues, J.B. Rose, A. Schriewer, C.D. Sinigalliano, S. Srinivasan, J. Stewart, L.C. Van De Werfhorst, D. Wang, R. Whitman, S. Wuertz, J. Jay, P.A. Holden, A.B. Boehm, O. Shanks, and J.F. Griffith. Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study. Water Research, 47(18):6897-6908 (doi:10.1016/j.watres.2013.05.060) (2013).

Manzello, D.P., I.C. Enochs, S. Musielewicz, R. Carlton, and D. Gledhill. Tropical cyclones cause CaCO3 undersaturation of coral reef seawater in a high-CO2 world. Journal of Geophysical Research, 118(10):5312-5321 (doi:10.1002/jgrc.20378) (2013).

Schriewer, A., K.D. Goodwin, C.D. Sinigalliano, A.M. Cox, D. Wanless, J. Bartkowiak, D.L. Ebentier, K.T. Hanley, J. Ervin, L.A. Deering, O.C. Shanks, L.A. Peed, W.G. Meijer, J.F. Griffith, J. Santo Domingo, J.A. Jay, P.A. Holden, and S. Wuertz. Performance evaluation of canine-associated Bacterioidales assays in a multi-laboratory comparison study. Water Research, 47(18):6909-6920 (doi:10.1016/ j.watres.2013.03.062) (2013).

Sinigalliano, C.D., J.S. Ervin, L.C. Van De Werfhorst, B.D. Badgley, E. Balleste, J. Bartkowiak, A.B. Boehm, M. Byappanahalli, K.D. Goodwin, M. Gourmelon, J. Griffith, P.A. Holden, J. Jay, B. Layton, C. Lee, J. Lee, W.G. Meijer, R. Noble, M. Raith, H. Ryu, M.J. Sadowsky, A. Schriewer, D. Wang, D. Wanless, R. Whitman, S. Wuertz, and J.W. Santo Domingo. Multi-laboratory evaluations of the performance of Catellicoccus marimammalium PCR assays developed to target gull fecal sources. Water Research, 47(18):6883-6896 (doi:10.1016/j.watres.2013.02.059) (2013).

Stewart, J.R., A.B. Boehm, E.A. Dubinsky, T.-T. Fong, K.D. Goodwin, J.F. Griffith, R.T. Noble, O.C. Shanks, K. Vijayavel, and S.B. Weisberg. Recommendations following a multi-laboratory comparison of microbial source tracking methods. Water Research, 47(18):6829-6838 (doi:10.1016/j.watres.2013.04.063) (2013).

Van Hooidon, R., J.A. Maynard, D. Manzello, and S. Planes. Opposite latitudinal gradients in projected ocean acidification and bleaching impacts on coral reefs. Global Change Biology, 20(1):103-112 (doi:10.1111/gcb.12394) (2014).

2013

Amornthammarong, N., J.-Z. Zhang, P.B. Ortner, J. Stamates, M. Shoemaker, and M.W. Kindel. A portable analyzer for the measurement of ammonium in marine waters. Environmental Science: Processes and Impacts, 15(3):579-584 (doi:10.1039/C2EM30793F) (2013).

Bignami, S., I.C. Enochs, D.P. Manzello, S. Sponaugle, and R.K. Cowen. Ocean acidification alters the otoliths of a pan-tropical fish species with implications for sensory function. Proceedings of the National Academy of Sciences USA, 110(18):7366-7370 (doi:10.1073/pnas.1301365110) (2013).

Bloetscher, F., J. Pire-Schmidt, D.E. Meeroff, T.P. Carsey, J. Stamates, K. Sullivan, and J.R. Proni. Farfield modeling of the Boynton Inlet plume. Environmental Management and Sustainable Development, 1(2):74-89 (doi:10.5296/emsd.v1i2.2134) (2012).

Carson, H.S., P.C. Lopez-Duarte, G.S. Cook, F.J. Fodrie, B.J. Becker, C. DiBacco, and L.A. Levin. Temporal, spatial, and interspecific variation in geochemical signatures within fish otoliths, bivalve larval shells, and crustacean larvae. Marine Ecology Progress Series, 473:133-148 (doi:10.3354/meps10078) (2013).

Cox, A.M., and K.D. Goodwin. Sample preparation methods for quantitative detection of DNA by molecular assays and marine biosensors. Marine Pollution Bulletin, 73(1):47-56 (doi:10.1016/j.marpolbul.2013.06.006) (2013).

Feely, R.A., R. Wanninkhof, C.L. Sabine, J.T. Mathis, T. Takahashi, S. Khatiwala, and G.-H. Park. Global oceans: Global ocean carbon cycle. In State of the Climate in 2012, J. Blunden and D.S. Arndt (eds.). Bulletin of the American Meteorological Society, 94(8):S72-S75 (doi:10.1175/2013BAMSStateoftheClimate.1) (2013).

Hower, S., M.C. Phillips, M. Brodsky, A. Dameron, M.A. Tamargo, N.C. Salazar, C.R. Jackson, J.B. Barrett, M. Davidson, J. Davis, S. Mukherjee, R.Y. Ewing, M.L. Gidley, C.D. Sinigalliano, L. Johns, F.E. Johnson, O. Adebanjo, and L.W.R. Plano. Clonally related methicillin-resistant Staphylococcus aureus isolated from short-finned pilot whales (Globicephala macrorhynchus), human volunteers, and a bayfront cetacean rehabilitation facility. Microbial Ecology, 65(4):1024-1038 (doi:10.1007/s00248-013-0178-3) (2013).

Kelble, C.R. Low salinity predation refugia could cause HAB initiation. Journal of Phycology, 49(91):18-19 (doi:10.1111/jpy.12015) (2013).

Kelble, C.R., D.K. Loomis, S. Lovelace, W.K. Nuttle, P.B. Ortner, P. Fletcher, G.S. Cook, J.J. Lorenz, and J.N. Boyer. The EBM-DPSER conceptual model: Integrating ecosystem services into the DPSIR framework. PLoS ONE, 8(8):e70766 (doi:10.1371/journal.pone.0070766) (2013).

Lopez-Duarte, P.C., H.S. Carson, G.S. COOK, F.J. Fodrie, B.J. Becker, C. DiBacco, and L.A. Levin. What controls connectivity? An empirical, multi-species approach. Integrative and Comparative Biology, 52(4):511-524 (doi:10.1093/icb/ics104) (2012).

Mantim, T., P. Saetear, S. Teerasong, S. Chan-Eam, K. Sereenonchai, N. Amornthammarong, N. Ratanawimarnwong, P. Wilairat, W. Meesiri, K. Uraisin, and D. Nacapricha. Reagent-free analytical flow methods for the soft drink industry: Efforts for environmentally friendly chemical analysis. Pure and Applied Chemistry, 84(10):2015-2025 (doi:10.1351/PAC-CON-12-02-06) (2012).

McLeod, E., K.R.N. Anthony, A. Andersson, R. Beeden, Y. Golbuu, J. Kleypas, K. Kroeker, D. Manzello, R.V. Salm, H. Schuttenberg, and J.E. Smith. Preparing to manage coral reefs for ocean acidification: Lessons from coral bleaching. Frontiers in Ecology and the Environment, 11(1):20-27 (doi:10.1890/110240) (2013).

Pfeil, B., A. Olsen, D.C.E. Bakker, S. Hankin, H. Koyuk, A. Kozyr, J. Malczyk, A. Manke, N. Metzl, C.L. Sabine, J. Akl, S.R. Alin, N. Bates, R.G.J. Bellerby, A. Borges, J. Boutin, P.J. Brown, W.-J. Cai, F.P. Chavez, A. Chen, C. Cosca, A.J. Fassbender, R.A. Feely, M. González-Dávila, C. Goyet, B. Hales, N. Hardman-Mountford, C. Heinze, M. Hood, M. Hoppema, C.W. Hunt, D. Hydes, M. Ishii, T. Johannessen, S.D. Jones, R.M. Key, A. Körtzinger, P. Landschützer, S.K. Lauvset, N. Lefčvre, A. Lenton, A. Lourantou, L. Merlivat, T. Midorikawa, L. Mintrop, C. Miyazaki, A. Murata, A. Nakadate, Y. Nakano, S. Nakaoka, Y. Nojiri, A.M. Omar, X.A. Padin, G.-H. Park, K. Paterson, F.F. Perez, D. Pierrot, A. Poisson, A.F. Ríos, J.M. Santana-Casiano, J. Salisbury, V.V.S.S. Sarma, R. Schlitzer, B. Schneider, U. Schuster, R. Sieger, I. Skjelvan, T. Steinhoff, T. Suzuki, T. Takahashi, K. Tedesco, M. Telszewski, H. Thomas, B. Tilbrook, J. Tjiputra, D. Vandemark, T. Veness, R. Wanninkhof, A.J. Watson, R. Weiss, C.S. Wong, and H. Yoshikawa-Inoue. A uniform, quality controlled Surface Ocean CO2 Atlas (SOCAT). Earth System Science Data, 5(1):125-143 (doi:10.5194/essd-5-125-2013) (2013).

Plano, L.R.W., T. Shibata, A.C. Garza, J. Kish, J.M. Fleisher, C.D. Sinigalliano, M.L. Gidley, K. Withum, S.M. Elmir, S. Hower, C.R. Jackson, J.B. Barrett, T. Cleary, M. Davidson, J. Davis, S. Mukherjee, L.E. Fleming, and H.M. Solo-Gabriele. Human-associated methicillin-resistant Staphylococcus aureus from a subtropical recreational marine beach. Microbial Ecology, 65(4):1039-1051 (doi:10.1007/s00248-013-0216-1) (2013).

Sabine, C.L., S. Hankin, H. Koyuk, D.C.E. Bakker, B. Pfeil, A. Olsen, N. Metzl, A. Kozyr, A. Fassbender, A. Manke, J. Malczyk, J. Akl, S.R. Alin, R.G.J. Bellerby, A. Borges, J. Boutin, P.J. Brown, W.-J. Cai, F.P. Chavez, A. Chen, C. Cosca, R.A. Feely, M. González-Dávila, C. Goyet, N. Hardman-Mountford, C. Heinze, M. Hoppema, C.W. Hunt, D. Hydes, M. Ishii, T. Johannessen, R.M. Key, A. Körtzinger, P. Landschützer, S.K. Lauvset, N. Lefčvre, A. Lenton, A. Lourantou, L. Merlivat, T. Midorikawa, L. Mintrop, C. Miyazaki, A. Murata, A. Nakadate, Y. Nakano, S. Nakaoka, Y. Nojiri, A.M. Omar, X.A. Padin, G.-H. Park, K. Paterson, F.F. Perez, D. Pierrot, A. Poisson, A.F. Ríos, J. Salisbury, J.M. Santana-Casiano, V.V.S.S. Sarma, R. Schlitzer, B. Schneider, U. Schuster, R. Sieger, I. Skjelvan, T. Steinhoff, T. Suzuki, T. Takahashi, K. Tedesco, M. Telszewski, H. Thomas, B. Tilbrook, D. Vandemark, T. Veness, A.J. Watson, R. Weiss, C.S. Wong, and H. Yoshikawa-Inoue. Surface Ocean CO2 Atlas (SOCAT) gridded data products. Earth System Science Data, 5(1):145-153 (doi:10.5194/essd-5-145-2013) (2013).

Schuster, U., G.A. McKinley, N. Bates, F. Chevallier, S.C. Doney, A.R. Fay, M. Gonzalez-Davila, N. Gruber, S. Jones, J. Krijnen, P. Landschützer, N. Lčfevre, M. Manizza, J. Mathis, N. Metzl, A. Olsen, A.F. Rios, C. Rödenbeck, J.M. Santana-Casiano, T. Takahashi, R. Wanninkhof, and A.J. Watson. An assessment of the Atlantic and Arctic sea-air CO2 fluxes, 1990-2009. Biogeosciences, 10(1):607-627 (doi:10.5194/bg-10-607-2013) (2013).

Van Hooidonk, R., J.A. Maynard, and S. Planes. Temporary refugia for coral reefs in a warming world. Nature Climate Change, 3(5):508-511 (doi:10.1038/nclimate1829) (2013).

Wang, Z.A., R. Wanninkhof, W.-J. Cai, R.H. Byrne, X. Hu, T.-H. PENG, and W.-J. Huang. The marine inorganic carbon system along the Gulf of Mexico and Atlantic coasts: Insights from a transregional coastal carbon study. Limnology and Oceanography, 58(1):325-342 (doi:10.4319/lo.2013.58.1.0325) (2013).

Wanninkhof, R., G.-H. Park, T. Takahashi, R.A. Feely, J.L. Bullister, and S.C. Doney. Changes in deep-water CO2 concentrations over the last several decades determined from discrete pCO2 measurements. Deep-Sea Research, Part I, 74:48-63 (doi:10.1016/j.dsr.2012.12.005) (2013).

Wanninkhof, R., G.-H. Park, T. Takahashi, C. Sweeney, R.A. Feely, Y. Nojiri, N. Gruber, S.C. Doney, G.A. McKinley, A. Lenton, C. Le Quere, C. Heinze, J. Schwinger, H. Graven, and S. Khatiwala. Global ocean carbon uptake: Magnitude, variability and trends. Biogeosciences, 10(3):1983-2000 (doi:10.5194/bg-10-1983-2013) (2013).

Zhang, J.-Z. Current wet persulfate digestion method considerably underestimates total phosphorus content in natural waters. Environmental Science and Technology, 46(24):13033-13034 (doi:10.1021/es304373f) (2012).

2012

Carsey, T., and J. Stamates. The Florida Area Coastal Environmental program supports science-based water quality management. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 152-153 (2012).

Dodrill, J., and P.J. Fletcher. Florida has an active artificial reef program. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 238 (2012).

Enns, A.A., L.J. Vogel, A.M. Abdelzaher, H.M. Solo-Gabriele, L.R.W. Plano, M.L. Gidley, M.C. Phillips, J.S. Klaus, A.M. Piggot, Z. Feng, A.J.H.M. Reniers, B.K. Haus, S.M. Elmir, Y. Zhang, N.H. Jimenez, N. Abdel-Mottaleb, M.E. Schoor, A. Brown, S.Q. Khan, A.S. Dameron, N.C. Salazar, and L.E. Fleming. Spatial and temporal variation in indicator microbe sampling is influential in beach management decisions. Water Research, 46(7):2237-2246 (doi:10.1016/j.watres.2012.01.040) (2012).

Enochs, I.C. Motile cryptofauna associated with live and dead coral substrates: Implications for coral mortality and framework erosion. Marine Biology, 159(4):709-722 (doi:10.1007/s00227-011-1848-7) (2012).

Enochs, I.C., and D.P. Manzello. Responses of cryptofaunal species richness and trophic potential to coral reef habitat degradation. Diversity, 4(1):94-104 (doi:10.3390/d4010094) (2012).

Enochs, I.C., and D.P. Manzello. Species richness of motile cryptofauna across a gradient of reef framework erosion. Coral Reefs, 31(3):653-661 (doi:10.1007/s00338-012-0886-z) (2012).

Enochs, I.C., L.T. Toth, V.W. Brandtneris, J.C. Afflerbach, and D.P. Manzello. Environmental determinants of motile cryptofauna on an eastern Pacific reef. Marine Ecology Progress Series, 438:105-118 (doi:10.3354/meps09259) (2011).

Everroad, R.C., and A.M. Wood. Phycoerythrin evolution and diversification of spectral phenotype in marine Synechococcus and related picocyanobacteria. Molecular Phylogenetics and Evolution, 64(3):381-392 (doi:10.1016/j.ympev.2012.04.013) (2012).

Feely, R.A., C.L. Sabine, R.H. Byrne, F.J. Millero, A.G. Dickson, R. Wanninkhof, A. Murata, L.A. Miller, and D. Greeley. Decadal changes in the aragonite and calcite saturation state of the Pacific Ocean. Global Biogeochemical Cycles, 26:GB3001 (doi:10.1029/2011GB004157), 15 pp. (2012).

Fletcher, P.J., and W.L. Kruczynski. Coral reefs and hardbottom habitats. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 13 (2012).

Fletcher, P.J., W.L. Kruczynski, and T.E. Lodge. Coastal lagoons and bays. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 12 (2012).

Fletcher, P.J., W.L. Kruczynski, and T.E. Lodge. Mangrove communities. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 11 (2012).

Fletcher, P.J., W.L. Kruczynski, and T.E. Lodge. Tropical hardwood hammocks. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 10 (2012).

Friedrich, T., A. Timmermann, A. Abe-Ouchi, N.R. Bates, M.O. Chikamoto, M.J. Church, J.E. Dore, D.K. Gledhill, M. Gonzalez-Davila, M. Heinemann, T. Ilyina, J.H. Jungclaus, E. McLeod, A. Mouchet, and J.M. Santana-Casiano. Detecting regional anthropogenic trends in ocean acidification against natural variability. Nature Climate Change, 2(3):167-171 (doi:10.1038/nclimate1372) (2012).

Gooch-Moore, J., K.D. Goodwin, C. Dorsey, R.D. Ellender, J.B. Mott, M. Ornelas, C.D. Sinigalliano, R. Vincent, D. Whiting, and S.H. Wolfe. New USEPA water quality criteria by 2012: GOMA concerns and recommendations. Journal of Water and Health, 9(4):718-733 (doi:10.2166/wh.2011.156) (2011).

Goodwin, K.D., M. McNay, Y. Cao, D. Ebentier, M. Madison, and J.F. Griffith. A multi-beach study of Staphylococcus aureus, MRSA, and enterococci in seawater and beach sand. Water Research, 46(13):4195-4207 (doi:10.1016/j.watres.2012.04.001) (2012).

Gramer, L.J., and J.C. Hendee. Sea surface temperature can be used to predict coral bleaching events. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 91 (2012).

Gramer, L.J., A.J. Mariano, and J.C. Hendee. Heat budget for Florida reefs: Reef-scale thermal stress via satellite. Proceedings, 12th International Coral Reef Symposium, D. Yellowlees and T.P. Hughes (eds.), Cairns, Australia, July 9-13, 2012. ARC Centre of Excellence for Coral Reef Studies, James Cook University, 5 pp. (2012).

Hendee, J.C., and L.J. Gramer. Oceanographic monitoring data are used to prepare ecoforecasts. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 67 (2012).

Hendee, J., L.J. Gramer, S.F. Heron, M. Jankulak, N. Amornthammarong, M. Shoemaker, T. Burgess, J. Fajans, S. Bainbridge, and W. Skirving. Wireless architectures for coral reef environmental monitoring. Proceedings, 12th International Coral Reef Symposium, D. Yellowlees and T.P. Hughes (eds.), Cairns, Australia, July 9-13, 2012. ARC Centre of Excellence for Coral Reef Studies, James Cook University, 5 pp. (2012).

Ho, D.T., C.L. Sabine, D. Hebert, D.S. Ullmann, R. Wanninkhof, R.C. Hamme, P.G. Strutton, B. Hales, J.B. Edson, and B.R. Hargreaves. Southern Ocean Gas Exchange Experiment: Setting the stage. Journal of Geophysical Research, 116:C00F08 (doi:10.1029/2010JC006852), 19 pp. (2011).

Huang, X.-L., and J.-Z. Zhang. Hydrolysis of glucose-6-phosphate in aged, acid-forced hydrolysed nanomolar inorganic iron solutions - an inorganic biocatalyst? RSC Advances, 2(1):199-208 (doi:10.1039/ C1RA00353D) (2012).

Huang, X.-L., and J.-Z. Zhang. Phosphorus sorption on marine carbonate sediment: Phosphonate as model organic compounds. Chemosphere, 85(8):1227-1232 (doi:10.1016/j.chemosphere.2011.07.016) (2011).

Kelble, C. Plankton type affects food webs. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 125 (2012).

Kelble, C. Salinity is an important variable in Florida Bay. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 120 (2012).

Kelble, C., C. Heil, and P.M. Gilbert. Water quality is monitored to assess environmental conditions. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 108-109 (2012).

Kruczynski, W.L., and P.J. Fletcher (eds.). In Tropical Connections: South Florida's Marine Environment. IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 492 pp. (2012).

Kruczynski, W.L., and P.J. Fletcher. Geological time with major evolutionary events in the fossil record. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 19 (2012).

Kruczynski, W.L., and P.J. Fletcher. Humans have significantly impacted south Florida and the Florida Keys. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 26-29 (2012).

Kruczynski, W.L., and P.J. Fletcher. Major hurricanes can have major impacts on marine environments. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 44-45 (2012).

Kruczynski, W.L., and P.J. Fletcher. Many planktonic larvae use tidal currents to migrate or maintain their position. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 85 (2012).

Kruczynski, W.L., and P.J. Fletcher. There are five species of sea turtles in south Florida. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 367-368 (2012).

Kruczynski, W.L., and P.J. Fletcher. You can help to lessen impacts to the environment. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 55 (2012).

Kruczynski, W.L., P.J. Fletcher, and N. Dorst. Hurricanes and tropical storms are regular features in south Florida. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 44-45 (2012).

Lance, V.P., P.G. Strutton, R.D. Vaillancourt, B.R. Hargreaves, J.-Z. Zhang, and J. Marra. Primary productivity, new productivity, and their relation to carbon flux during two Southern Ocean Gas Exchange tracer experiments. Journal of Geophysical Research, 117:C00F14 (doi:10.1029/2011JC007687), 14 pp. (2012).

Manzello, D.P., I.C. Enochs, N. Melo, D.K. Gledhill, and E.M. Johns. Ocean acidification refugia of the Florida Reef track. PLoS ONE, 7(7):e41715 (doi:10.1371/journal.pone.0041715), 10 pp. (2012).

Moyer, R.P., T.S. Viehman, G.A. Piniak, and D.K. Gledhill. Linking seasonal changes in benthic community structure to seawater chemistry. Proceedings, 12th International Coral Reef Symposium, D. Yellowlees and T.P. Hughes (eds.), Cairns, Australia, July 9-13, 2012. ARC Centre of Excellence for Coral Reef Studies, James Cook University, 5 pp. (2012).

Park, G.-H., and R. Wanninkhof. A large increase of the CO2 sink in the western tropical North Atlantic from 2002-2009. Journal of Geophysical Research, 117:C08029 (doi:10.1029/2011JC007803), 10 pp. (2012).

Ryan, J.P., Y. Zhang, H. Thomas, E.V. Rienecker, R.K. Nelson, and S.R. Cummings. A high-resolution survey of a deep hydrocarbon plume in the Gulf of Mexico during the 2010 Macondo blowout. In Monitoring and Modeling the Deepwater Horizon Oil Spill: A Record-Breaking Enterprise, Y. Liu, A. MacFadyen, Z.-G. Ji, and R. Weisberg (eds.). AGU Geophysical Monograph Book Series, 195:63-75 (doi:10.1029/2011GM001106) (2011).

Sabine, C.L., R.A. Feely, R. Wanninkhof, T. Takahashi, S. Khatiwala, and G.-H. Park. Global oceans: Global ocean carbon cycle. In State of the Climate in 2011, J. Blunden and D.S. Arndt (eds.). Bulletin of the American Meteorological Society, 93(7):S84-S89 (doi:10.1175/2012BAMSStateoftheClimate.1) (2012).

Shanks, O.C., M. Sivaganesan, L. Peed, C.A. Kelty, A.D. Blackwood, M.R. Greene, R.T. Noble, R.N. Bushon, E.A. Stelzer, J. Kinzelman, T. Anan'eva, C. Sinigalliano, D. Wanless, J. Griffith, Y. Cao, S. Weisberg, V.J. Harwood, C. Staley, K.H. Oshima, M. Varma, and R.A. Haugland. Interlaboratory comparison of real-time PCR protocols for quantification of general fecal indicator bacteria. Environmental Science and Technology, 46(2):945-953 (doi:10.1021/es2031455) (2012).

Toth, L.T., R.B. Aronson, S.V. Vollmer, J.W. Hobbs, D.H. Urrego, H. Cheng, I.C. Enochs, D.J. Combosch, R. van Woesik, and I.G. Macintyre. ENSO drove 2500-year collapse of eastern Pacific coral reefs. Science, 337(6090):81-84 (doi: 10.1126/science.1221168) (2012).

Van Hooidonk, R., and M. Huber. Effects of modeled tropical sea surface temperature variability on coral reef bleaching predictions. Coral Reefs, 31(1):121-131 (doi:10.1007/s00338-011-0825-4) (2012).

Van Hooidonk, R.J., D.P. Manzello, J. Moye, M.E. Brandt, J.C. Hendee, C. McCoy, and C. Manfrino. Coral bleaching at Little Cayman, Cayman Islands, 2009. Estuarine, Coastal and Shelf Science, 106:80-84 (doi:10.1016/j.ecss.2012.04.021) (2012).

Wanless, H., W.L. Kruczynski, and P.J. Fletcher. Climate change will have several potential impacts to south Florida. In Tropical Connections: South Florida's Marine Environment, W.L. Kruczynski and P.J. Fletcher (eds.). IAN Press, University of Maryland Center for Environmental Science, Cambridge, MD, 35 (2012).

Yamahara, K.M., L.M. Sassoubre, K.D. Goodwin, and A.B. Boehm. Occurrence and persistence of bacterial pathogens and indicator organisms in beach sand along the California coast. Applied and Environmental Microbiology, 78(6):1733-1745 (doi:10.1128/AEM.06185-11) (2012).

2011

Abdelzaher, A.A., M.E. Wright, C. Ortega, A.R. Hasan, T. Shibata, H.M. Solo-Gabriele, J. Kish, K. Withum, G. He, S.M. Elmir, J.A. Bonilla, T.D. Bonilla, C.J. Palmer, T.M. Scott, J. Lukasik, V.J. HarWood, S. McQuaig, C.D. Sinigalliano, M.L. Gidley, D. Wanless, L.R.W. Plano, A.C. Garza, X. Zhu, J.R. Stewart, J.W. Dickerson, H. Yampara-Iquise, C. Carson, J.M. Fleisher, and L.E. Fleming. Daily measures of microbes and human health at a non-point source marine beach. Journal of Water and Health, 9(3):443-457 (doi:10.2166/ wh.2011.146) (2011).

Amornthammarong, N., J.-Z. Zhang, and P.B. Ortner. An autonomous batch analyzer for the determination of trace ammonium in natural waters using fluorometric detection. Analytical Methods, 3(7):1501-1506 (doi:10.1039/C1AY05095H) (2011).

Barbero, L., J. Boutin, L. Merlivat, N. Martin, T. Takahashi, S.C. Sutherland, and R. Wanninkhof. Importance of water mass formation regions for the air-sea CO2 flux estimate in the Southern Ocean. Global Biogeochemical Cycles, 25:GB1005 (doi:10.1029/2010GB003818), 16 pp. (2011).

Bender, M.L., S. Kinter, N. Cassar, and R. Wanninkhof. Evaluating gas transfer velocity parameterizations using upper ocean radon distributions. Journal of Geophysical Research, 116:C02010 (doi:10.1029/ 2009JC005805), 11 pp. (2011).

Eakin, C.M., C.J. Nim, R.E. Brainard, C. Aubrecht, C. Elvidge, D.K. Gledhill, F. Muller-Karger, P.J. Mumby,W.J. Skirving, A.E. Strong, M. Wang, S. Weeks, F. Wentz, and D. Ziskin. Monitoring coral reefs from space. Oceanography, 23(4):118-133 (doi.org/10.5670/oceanog.2010.10) (2010).

Eakin, C.M., J.A. Morgan, S.F. Heron, T.B. Smith, G. Liu, L. Alvarez-Filip, B. Baca, E. Bartels, C. Bastidas, C. Bouchon, M. Brandt, A.W. Bruckner, L. Bunkley-Williams, A. Cameron, B.D. Causey, M. Chiappone, T.R.L. Christensen, M.J.C. Crabbe, O. Day, E. de la Guardia, G. Diaz-Pulido, D. DiResta, D.L. Gil-Agudelo, D.S. Gilliam, R.N. Ginsburg, S. Gore, H.M. Guzman, J.C. Hendee, E.A. Hernandez-Delgado, E. Husain, C.F.G. Jeffrey, R.J. Jones, E. Jordan-Dahlgren, L.S. Kaufman, D.I. Kline, P.A. Kramer, J.C. Lang, D. Lirman, J. Mallela, C. Manfrino, J.-P. Marechal, K. Marks, J. Mihaly, W.J. Miller, E. M. Mueller, E.M. Muller, C.A. Orozco Toro, H.A. Oxenford, D. Ponce-Taylor, N. Quinn, K.B. Ritchie, S. Rodriguez, A. Rodriguez Ramirez, S. Romano, J.F. Samhouri, J.A. Sanchez, G.P. Schmahl, B.V. Shank, W.J. Skirving, S.C.C. Steiner, E. Villamizar, S.M. Walsh, C. Walter, E. Weil, E.H. Williams, K. Woody-Roberson, and Y. Yusuf. Caribbean corals in crisis: Record thermal stress, bleaching, and mortality in 2005. PLoS ONE, 5(11):e13969 (doi:10.1371/journal.pone.0013969) (2010).

Fleisher, J.M., L.E. Fleming, H.M. Solo-Gabriele, J.K. Kish, C.D. Sinigalliano, L.W. Plano, S.M. Elmir, J.D. Wang, K.F. Withum, T. Shibata, M.L. Gidley, A. Abdelzaher, G. He, C. Ortega, X. Zhu, M.D. Wright, J.A. Hollenbeck, and L.C. Backer. The BEACHES Study: Health effects and exposures from nonpoint source microbial contaminants in subtropical recreational marine waters. International Journal of Epidemiology, 39(5):1291-1298 (doi:10.1093/ije/dyq084) (2010).

Fletcher, P.J., and S. Mulki. Training video for water quality sampling and analysis. In Water Quality Concepts, Sampling, and Analysis, Y. Li and K. Migliaccio (eds.). CRC Press, Boca Raton, 313-323 (doi:10.1201/b10157-16) (2011).

Glynn, P.W., and I.C. Enochs. Invertebrates and their roles in coral reef ecosystems. In Coral Reefs: An Ecosystem in Transition, Z. Dubinsky and N. Stambler (eds.) Springer, 273-326 (2010).

Glynn, P.W., S.B. Colley, H.M. Guzman, I.C. Enochs, J. Cortes, J.L. Mate, and J.S. Feingold. Reef coral reproduction in the eastern Pacific: Costa Rica, Panamá and the Galápagos Islands (Ecuador). VI. Agariciidae, Pavona clavus. Marine Biology, 158(7):1601-1617 (doi: 10.1007/s00227-011-1673-z) (2011).

Goodkin, N.F., N.M. Levine, S.C. Doney, and R. Wanninkhof. Impacts of temporal CO2 and climate trends on the detection of ocean anthropogenic CO2 accumulation. Global Biogeochemical Cycles, 25:GB3023 (doi:10.1029/2010GB004009), 11 pp. (2011).

Helmle, K.P., and R.E. Dodge. Sclerochronology. In: Encyclopedia of Modern Coral Reefs: Structure, Form, and Process, D. Hopley (ed.). Springer Verlag (doi:10.1007/978-90-481-2639-2), 958-966 (2011).

Helmle, K.P., R.E. Dodge, P.K. Swart, D.K. Gledhill, and C.M. Eakin. Growth rates of Florida corals from 1937 to 1996 and their response to climate change. Nature Communications, 2:215 (doi:10.1038/ ncomms1222) (2011).

Ho, D.T., R. Wanninkhof, P. Schlosser, D.S. Ullman, D. Hebert, and K.F. Sullivan. Towards a universal relationship between wind speed and gas exchange: Gas transfer velocities measured with 3He/SF6 during the Southern Ocean Gas Exchange Experiment. Journal of Geophysical Research, 116:C00F04 (doi:10.1029/ 2010JC006854), 13 pp. (2011).

Huang, X.-L., and J.-Z. Zhang. Spatial variation in sediment-water exchange of phosphorus in Florida Bay: AMP as a model organic compound. Environmental Science and Technology, 44(20):7790-7795 (doi:10.1021/ es100057r) (2010).

Jiang, L.-Q., W.-J. Cai, R.A. Feely, Y. Wang, X. Guo, D.K. Gledhill, X. Hu, F. Arzayus, F. Chen, J. Hartmann, and L. Zhang. Carbonate mineral saturation states along the U.S. east coast. Limnology and Oceanography, 55(6):2424-2432 (doi:10.4319/lo.2010.55.6.2424) (2010).

Levine, N.M., S.C. Doney, I. Lima, R. Wanninkhof, N.R. Bates, and R.A. Feely. The impact of the North Atlantic Oscillation on the uptake and accumulation of anthropogenic CO2 by North Atlantic Ocean mode waters. Global Biogeochemical Cycles, 25:GB3022 (doi:10.1029/2010GB003892), 15 pp. (2011).

Lirman, D., S. Schopmeyer, D. Manzello, L.J. Gramer, W.F. Precht, F. Muller-Karger, K. Banks. B. Barnes, E. Bartels, A. Bourque, J. Byrne, S. Donahue, J. Duquesnel, L. Fisher, D. Gilliam, J. Hendee, M. Johnson, K. Maxwell, E. McDevitt, J. Monty, D. Rueda, R. Ruzicka, and S. Thanner. Severe 2010 cold-water event caused unprecedented mortality to corals of the Florida Reef Tract and reversed previous survivorship patterns. PLoS ONE, 6(8):E23047 (doi:10.1371/journal.pone.0023047) (2011).

Mendoza, Y., K.D. Goodwin, and J.D. Happell. Microbial removal of atmospheric carbon tetrachloride in bulk aerobic soils. Applied and Environmental Microbiology, 77(17):5835-5841 (doi:10.1128/AEM.05341-11) (2011).

Metzl, N., A. Corbiere, G. Reverdin, A. Lenton, T. Takahashi, A. Olsen, T. Johannessen, D. Pierrot, R. Wanninkhof, S.R. Olafsdottir, J. Olafsson, and M. Ramonet. Recent acceleration of the sea surface fCO2 growth rate in the North Atlantic subpolar gyre (1993-2008) revealed by winter observations. Global Biogeochemical Cycles, 24:GB4004 (doi:10.1029/2009GB003658), 13 pp. (2010).

Miller, S.R., A.M. Wood, R.E. Blankenship, M. Kim, and S. Ferriera. Dynamics of gene duplication in the genomes of chlorophyll d-producing cyanobacteria: Implications for the ecological niche. Genome Biology and Evolution, 3:601-613 (doi:10.1093/gbe/evr060) (2011).

PARK, G.-H., R. Wanninkhof, S.C. Doney, T. Takahashi, K. Lee, R.A. Feely, C.L. Sabine, J. Trińanes, and I.D. Lima. Variability of global net sea-air CO2 fluxes over the last three decades using empirical relationships. Tellus B, 62(5):352-368 (doi: 10.1111/j.1600-0889.2010.00498.x) (2010).

Plano, L.R.W., A. Garza, T. Shibata, S.M. Elmir, J. Kish, C.D. Sinigalliano, M.L. Gidley, G. Miller, K. Withum, L.E. Fleming, and H.M. Solo-Garbriele. Shedding of staphylococcus aureus and methicillin-resistant Staphylococcus aureus from adult and pediatric bathers in marine waters. BMC Microbiology, 11:5 (doi:10.1186/1471-2180-11-5), 10 pp. (2011).

Sabine, C.L., R.A. Feely, R. Wanninkhof, T. Takahashi, S. Khatiwala, and G.-H. PARK. Global oceans: The global ocean carbon cycle. In State of the Climate in 2010, J. Blunden, D.S. Arndt, and M.O. Baringer (eds.). Bulletin of the American Meteorological Society, 92(6):S100-S105 (doi:10.1175/1520-0477-92.6.S1) (2011).

Shah, A.H., A.M. Abdelzaher, M. Phillips, R. Hernandez, H.M. Solo-Gabriele, J. Kish, G. Scorzetti, J.W. Fell, M.R. Diaz, T.M. Scott, J. Lukasik, V.J. HarWood, S. McQuaig, C.D. Sinigalliano, M.L. Gidley, D. Wanless, A. Agar, J. Lui, J.R. Stewart, L.R.W. Plano, and L.E. Fleming. Indicator microbes correlate with pathogenic bacteria, yeast, and helminthes in sand at a subtropical recreational beach site. Journal of Applied Microbiology, 110(6):1571-1583 (doi:10.1111/j.1365-2672.2011.05013.x.) (2011).

Shibata, T., H.M. Solo-Gabriele, C.D. Sinigalliano, M.L. Gidley, L.R.W. Plano, J.M. Fleisher, J.D. Wang, S.M. Elmir, G. He, M.E. Wright, A.M. Abdelzaher, C. Ortega, D. Wanless, A.C. Garza, J. Kish, T. Scott, J. Hollenbeck, L.C. Backer, and L.E. Fleming. Evaluation of conventional and alternative monitoring methods for a recreational marine beach with nonpoint source of fecal contamination. Environmental Science and Technology, 44(21):8175-8181 (doi:10.1021/es100884w) (2010).

Solo-Gabriele, H.M., A.B. Boehm, T.M. Scott, and C.D. Sinigalliano. Microbial source tracking in beaches and coastal environments. In Microbial Source Tracking: Methods, Applications, and Case Studies, E. Hagedorn, A. Blanch, and V.J. HarWood (eds.). Springer Press, 451-484 (2011).

Stanley, G.D., and K.P. Helmle. Middle Triassic coral growth bands and their implication for photosymbiosis. Palaios, 25(12):754-763 (doi:10.2110/palo.2010.p10-039r) (2010).

Viau, E.J., K.D. Goodwin, K.M. Yamahara, B.A. Layton, L.M. Sassoubre, S.L. Burns, H.-I. Tong, S.H.C. Wong, Y. Lu, and A.B. Boehm. Bacterial pathogens in Hawaiian coastal streams: Associations with fecal indicators, land cover, and water quality. Water Research, 45(11):3279-3290 (doi:10.1016/j.watres.2011.03.033) (2011).

Wanninkhof, R., G.-H. PARK, D. Chelton, and C. Risien. Impact of small-scale variability on air-sea CO2 fluxes. In Gas Transfer at Water Surfaces, S. Komori, W. McGillis, and R. Kurose (eds.). Kyoto University Press, Kyoto, 431-444 (2011).

Wanninkhof, R., S.C. Doney, J.L. Bullister, N.M. Levine, M. Warner, and N. Gruber. Detecting anthropogenic CO2 changes in the interior Atlantic Ocean between 1989 and 2005. Journal of Geophysical Research, 115:C11028 (doi:10.1029/2010JC006251), 25 pp. (2010).

Zhang, J.-Z. Avoiding spurious correlation in analysis of chemical kinetic data. Chemical Communications, 47(24):6861-6863 (doi:10.1039/C1CC11278C) (2011).

Zhang, J.-Z., and X.-L. Huang. Effect of temperature and salinity on phosphate sorption on marine sediments. Environmental Science and Technology, 45(16):6831-6837 (doi:10.1021/es200867p) (2011).

2010

Abdelzaher, A.M., M.E. Wright, C. Ortega, H.M. Solo-Gabriele, G. Miller, S. Elmir, X. Newman, P. Shih, J.A. Bonilla, T.D. Bonilla, C.J. Palmer, T. Scott, J. Lukasik, V.J. Harwood, S. McQuaig, C. Sinigalliano, M. Gidley, L.R.W. Plano, X. Zhu, J.D. Wang, and L.E. Fleming, 2010: Presence of pathogens and indicator microbes at a non-point source subtropical recreational marine beach. Applied and Environmental Microbiology, 76(3):724-732.

Amornthammarong, N., P.B. Ortner, and J.-Z. Zhang, 2010: A simple, effective mixing chamber used in conjunction with a syringe pump for flow analysis. Talanta, 81(4-5), 1472-1476.

Borges, A.V., S.R. Alin, F.P. Chavez, P. Vlahos, K.S. Johnson, J.T. Holt, W.M. Balch, N. Bates, R. Brainard, W.-J. Cai, C.T.A. Chen, K. Currie, M. Dai, M. DeGrandpre, B. Delille, A. Dickson, W. Evans, R.A. Feely, G.E. Friederich, G.-C. Gong, B. Hales, N. Hardman-Mountford, J. Hendee, J.M. Hernandez-Ayon, M. Hood, E. Huertas, D. Hydes, D. Ianson, E. Krasakopoulou, E. Litt, A. Luchetta, J. Mathis, W.R. McGillis, A. Murata, J. Newton, J. Olafsson, A. Omar, F.F. Perez, C. Sabine, J.E. Salisbury, R. Salm, V.V.S.S. Sarma, B. Schneider, M. Sigler, H. Thomas, D. Turk, D. Vandemark, R. Wanninkhof, and B. Ward, 2010: A global sea surface carbon observing system: Inorganic and organic carbon dynamics in coastal oceans. In OceanObs'09: Sustained Ocean Observations and Information for Society (Volume 2), J. Hall, D.E. Harrison, and D. Stammer (eds.). European Space Agency Publication, WPP-306, 20 pp.

Brainard, R.E., S. Bainbridge, R. Brinkman, C.M. Eakin, M. Field, J.-P. Gattuso, D. Gledhill, L. Gramer, A. Green, J. Hendee, R.K. Hoeke, S.J. Holbrook, O. Hoegh-Guldberg, M. Lammers, D. Manzello, M. McManus, R. Moffitt, M. Monaco, J.A. Morgan, D. Obura, S. Planes, R.J. Schmitt, C. Steinberg, H. Sweatman, O.J. Vetter, C. Wilkinson, and K.B. Wong, 2010: An international network of coral reef ecosystem observing systems (I-CREOS). In OceanObs'09: Sustained Ocean Observations and Information for Society (Volume 2), J. Hall, D.E. Harrison, and D. Stammer (eds.). European Space Agency Publication, WPP-306, 15 pp.

Cai, W.-J., X. Hu, W.-J. Huang, L.-Q. Jiang, Y. Wang, T.-H. Peng, and X. Zhang, 2010: Alkalinity distribution in the western North Atlantic Ocean margins. Journal of Geophysical Research, 115:C08014, 15 pp. (doi:10.1029/ 2009JC005482).

Cai, W.-J., L. Chen, B. Chen, Z. Gao, S.-H. Lee, J. Chen, D. Pierrot, K. Sullivan, Y. Wang, X. Hu, W.-J. Huang, Y. Zhang, S. Xu, A. Murata, J.M. Grebmeier, E.P. Jones, and H. Zhang, 2010: Decrease in the CO2 uptake capacity in an ice-free Arctic Ocean basin. Science, 329(5991):556-559.

Diaz, M.R., J.W. Jacobson, K.D. Goodwin, S.A. Dunbar, and J.W. Fell, 2010: Molecular detection of harmful algal blooms (HABs) using locked nucleic acids and bead array technology. Limnology and Oceanography: Methods, 8:269-284.

Eakin, C.M., C.J. Nim, R.E. Brainard, C. Aubrecht, C. Elvidge, D.K. Gledhill, F. Muller-Karger, P.J. Mumby, W.J. Skirving, A.E. Strong, M. Wang, S. Weeks, F. Wentz, and D. Ziskin, 2010: Monitoring coral reefs from space. Oceanography, 23(4):118-133.

Eakin, C.M., J.A. Morgan, S.F. Heron, T.B. Smith, G. Liu, L. Alvarez-Filip, B. Baca, E. Bartels, C. Bastidas, C. Bouchon, M. Brandt, A.W. Bruckner, L. Bunkley-Williams, A. Cameron, B.D. Causey, M. Chiappone, T.R.L. Christensen, M.J.C. Crabbe, O. Day, E. de la Guardia, G. Diaz-Pulido, D. DiResta, D.L. Gil-Agudelo, D.S. Gilliam, R.N. Ginsburg, S. Gore, H.M. Guzman, J.C. Hendee et al., 2010: Caribbean corals in crisis: Record thermal stress, bleaching, and mortality in 2005. PloS ONE, 5(11):e13969 (doi:10.1371/journal.pone.0013969).

Fleisher, J.M., L.E. Fleming, H.M. Solo-Gabriele, J.K. Kish, C.D. Sinigalliano, L.W. Plano, S.M. Elmir, J.D. Wang, K.F. Withum, T. Shibata, M.L. Gidley, A. Abdelzaher, G. He, C. Ortega, X. Zhu, M.D. Wright, J.A. Hollenbeck, and L.C. Backer, 2010: The BEACHES Study: Health effects and exposures from nonpoint source microbial contaminants in subtropical recreational marine waters. International Journal of Epidemiology, 39(5):1291-1298 (doi:10.1093/ije/dyq084).

Garzoli, S.L., O. Boebel, H. Bryden, R.A. Fine, M. Fukasawa, S. Gladyshev, G. Johnson, M. Johnson, A. MacDonald, C.S. Meinen, H. Mercier, A. Orsi, A. Piola, S. Rintoul, S. Speich, M. Visbeck, and R. Wanninkhof, 2010: Progressing towards global sustained deep ocean observations. In OceanObs'09: Sustained Ocean Observations and Information for Society (Volume 2), J. Hall, D.E. Harrison, and D. Stammer (eds.). European Space Agency Publication, WPP-306, 12 pp.

Huang, X.-L., and J.-Z. Zhang, 2010: Spatial variation in sediment-water exchange of phosphorus in Florida Bay: AMP as a model organic compound. Environmental Science and Technology, 44(20):7790-7795 (doi:10.1021/ es100057r).

Jiang, L.-Q., W.-J. Cai, R.A. Feely, Y. Wang, X. Guo, D.K. Gledhill, X. Hu, F. Arzayus, F. Chen, J. Hartmann, and L. Zhang, 2010: Carbonate mineral saturation states along the U.S. east coast. Limnology and Oceanography, 55(6):2424-2432 (doi:10.4319/lo.2010.55.6.2424).

Juranek, L.W., R.C. Hamme, J. Kaiser, R. Wanninkhof, and P.D. Quay, 2010: Evidence of O2 consumption in underway seawater lines: Implications for air-sea O2 and CO2 fluxes. Geophysical Research Letters, 37:L01601, doi:10.1029/2009GL040423.

Kelble, C.R., P.B. Ortner, G.L. Hitchcock, M.J. Dagg, and J.N. Boyer, 2010: Temporal and spatial variability of mesozooplankton in a shallow subtropical bay: Influence of top-down control. Estuaries and Coasts, 33(3):727-737.

Keul, N., J.W. Morse, R. Wanninkhof, D.K. Gledhill, and T.S. Bianchi, 2010: Carbonate chemistry dynamics of surface waters in the northern Gulf of Mexico. Aquatic Geochemistry, 16(3):337-351.

Kimball, S.K., M.S. Mulekar, S. Cummings, and J. Stamates, 2010: The University of South Alabama Mesonet and coastal observing system: A technical and statistical overview. Journal of Atmospheric and Oceanic Technology, 27(9):1417-1439.

Manzello, D.P., 2010: Coral growth with thermal stress and ocean acidification: Lessons from the eastern tropical Pacific. Coral Reefs, 29(3):749-758.

Manzello, D.P., 2010: Ocean acidification hotspots: Spatiotemporal dynamics of the seawater CO2-system from eastern Pacific coral reefs. Limnology and Oceanography, 55(1):239-248.

Metzl, N., A. Corbiere, G. Reverdin, A. Lenton, T. Takahashi, A. Olsen, T. Johannessen, D. Pierrot, R. Wanninkhof, S.R. Olafsdottir, J. Olafsson, and M. Ramonet, 2010: Recent acceleration of the sea surface fCO2 growth rate in the North Atlantic subpolar gyre (1993-2008) revealed by winter observations. Global Biogeochemical Cycles, 24:GB4004, 13 pp. (doi:10.1029/2009GB003658).

Monteiro, P.M.S., U. Schuster, M. Hood, A. Lenton, M. Metzl, A. Olsen, K. Rogers, C. Sabine, T. Takahashi, B. Tilbrook, J. Yoder, R. Wanninkhof, and A.J. Watson, 2010: A global sea surface carbon observing system: Assessment of changing sea surface CO2 and air-sea CO2 fluxes. In OceanObs'09: Sustained Ocean Observations and Information for Society (Volume 2), J. Hall, D.E. Harrison, and D. Stammer (eds.). European Space Agency Publication, WPP-306, 13 pp.

Park, G.-H., R. Wanninkhof, S.C. Doney, T. Takahashi, K. Lee, R.A. Feely, C.L. Sabine, J. Trinanes, and I.D. Lima, 2010: Variability of global net sea-air CO2 fluxes over the last three decades using empirical relationships. Tellus B, 62(5):352-368 (doi:10.1111/j.1600-0889.2010.00498.x).

Peng, T.-H., and R. Wanninkhof, 2010: Increase of anthropogenic CO2 in the Atlantic Ocean in the last two decades. Deep-Sea Research, Part I, 57(6):755-770.

Pierrot, D., P. Brown, S. Van Heuven, T. Tanhua, U. Schuster, R. Wanninkhof, and R.M. Key, 2010: CARINA TCO2 data in the Atlantic Ocean. Earth System Science Data, 2(2):177-187.

Sabine, C.L., R.A. Feely, R. Wanninkhof, T. Takahashi, S. Khatiwala, and G.-H. Park, 2010: The global ocean carbon cycle. In State of the Climate in 2009, D.S. Arndt. M.O. Baringer, and M.R. Johnson (eds.). Bulletin of the American Meteorological Society, 91(6):71-75.

Sereenonchai, K., S. Teerasong, S. Chan-Eam, P. Saetear, N. Choengchan, K. Uraisin, N. Amornthammarong, S. Motomizu, and D. Nacapricha, 2010: A low-cost method for determination of calcium carbonate in cement by membraneless vaporization with capacitively coupled contactless conductivity detection. Talanta, 81(3):1040-144.

Shibata, T., H.M. Solo-Gabriele, C.D. Sinigalliano, M.L. Gidley, L.R.W. Plano, J.M. Fleisher, J.D. Wang, S.M. Elmir, G. He, M.E. Wright, A.M. Abdelzaher, C. Ortega, D. Wanless, A.C. Garza, J. Kish, T. Scott, J. Hollenbeck, L.C. Backer, and L.E. Fleming, 2010: Evaluation of conventional and alternative monitoring methods for a recreational marine beach with nonpoint source of fecal contamination. Environmental Science and Technology, 44(21):8175-8181 (doi:10.1021/es100884w).

Sinigalliano, C.D., J.M. Fleisher, M.L. Gidley, H.M. Solo-Gabriele, T. Shibata, L.R.W. Plano, S.M. Elmir, D. Wanless, J. Bartkowiak, R. Boiteau, K. Withum, A.M. Abdelzaher, G. He, C. Ortega, X. Zhu, M.E. Wright, J. Kish, J. Hollenbeck, T. Scott, L.C. Backer, and L.E. Fleming, 2010: Traditional and molecular analyses for fecal indicator bacteria in non-point source subtropical recreational marine waters. Water Research, 44(13):3763-3772.

Stanley, G.D., and K.P. Helmle, 2010: Middle Triassic coral growth bands their implication for photosymbiosis. Palaios, 25(12):754-763 (doi:10.2110/palo.2010.p10-039r).

Swart, P.K., L. Greer, B.E. Rosenheim, C.S. Moses, A.J. Waite, A. Winter, R.E. Dodge, and K. Helmle, 2010: The 13C Suess effect in scleractinian corals mirror changes in the anthropogenic CO2 inventory of the surface oceans. Geophysical Research Letters, 37(5):L05604 (doi:10.1029/2009GL041397).

Tanhua, T., R. Steinfeldt, R.M. Key, P. Brown, N. Gruber, R. Wanninkhof, F. Perez, A. Kortzinger, A. Velo, U. Schuster, S. van Heuven, J.L. Bullister, I. Stendardo, M. Hoppema, A. Olsen, A. Kozyr, D. Pierrot, C. Schirnick, and D.W.R. Wallace, 2010: Atlantic Ocean CARINA data: Overview and salinity adjustments. Earth System Science Data, 2(1):17-34.

Teerasong, S., S. Chan-Eam, K. Sereenonchai, N. Amornthammarong, N. Ratanawimarnwong, and D. Nacapricha, 2010: A reagent-free SIA module for monitoring of sugar, color, and dissolved CO2 content in soft drinks. Analytica Chimica Acta, 668(1):47-53.

Teerasong, S., N. Amornthammarong, K. Grudpan, N. Teshima, T. Sakai, D. Nacapricha, and N. Ratanawimarnwong, 2010: A multiple processing hybrid flow system for analysis of formaldehyde contamination in food. Analytical Sciences, 26(5):629-633.

Tweddle, J.F., P.G. Strutton, D.G. Foley, L. O'Higgins, A.M. Wood, B. Scott, R.C. Everroad, W.T. Peterson, D. Cannon, M. Hunter, and Z. Forster, 2010: Relationships among upwelling, phytoplankton blooms, and phycotoxins in coastal Oregon shellfish.

Marine Ecology Progress Series, 405:131-145.

Wanninkhof, R., S.C. Doney, J.L. Bullister, N.M. Levine, M. Warner, and N. Gruber, 2010: Detecting anthropogenic CO2 changes in the interior Atlantic Ocean between 1989 and 2005. Journal of Geophysical Research, 115:C11028, 25 pp. (doi:10.1029/2010JC006251).

Zhang, J.-Z., L. Guo, and C.J. Fischer, 2010: Abundance and chemical speciation of phosphorus in sediments of the Mackenzie River Delta, the Chukchi Sea, and the Bering Sea: Importance of detrital apatite. Aquatic Geochemistry, 16(3):353-371.

2009

Amornthammarong, N., and J.-Z. Zhang, 2009: Liquid-waveguide spectrophotometric measurement of low silicate in natural waters. Talanta, 79(3):621-626.

Amornthammarong, N., D. Nacapricha, K. Sereenonchai, P. Anujarawat, and P. Wilairat, 2009: Audible-wave telemetry with PC sound card for remote analysis applications, 2009: In Telemetry: Research, Technology, and Applications, D. Barculo and J. Daniels (eds.). Nova Science Publishers, New York, 205-214.

Boehm, A.B., J. Griffith, C. McGee, T.A. Edge, H.M. Solo-Gabriele, R. Whitman, Y. Cao, M. Getrich, J.A. Jay, D. Ferguson, K.D. Goodwin, C.M. Lee, M. Madison, and S.B. Weisberg, 2009: Fecal indicator bacteria enumeration in beach sand: A comparison study of extraction methods in medium to coarse sands. Journal of Applied Microbiology, 107(5):1740-1750.

Boyer, J.N., C.R. Kelble, P.B. Ortner, and D.T. Rudnick, 2009: Phytoplankton bloom status: An indicator of water quality condition in the southern estuaries of Florida, USA. Ecological Indicators, 9(6) (Suppl):S56-S67.

Carsey, T., K.D. Goodwin, J. Hendee, J.R. Proni, C. Sinigalliano, J. Stewart, J.-Z. Zhang, N. Amornthammarong, J. Craynock, S. Cummings, P. Dammann, C. Featherstone, J. Stamates, and K. Sullivan, 2009: A glimpse of the Florida Area Coastal Environment (FACE) program. Proceedings, 11th International Coral Reef Symposium, Ft. Lauderdale, FL, July 7-11, 2008. International Society for Reef Studies, 559-563.

Chierici, M., A. Olsen, T. Johannessen, J. Trinanes, and R. Wanninkhof, 2009: Algorithms to estimate the carbon dioxide uptake in the northern North Atlantic using shipboard observations, satellite, and ocean analysis data. Deep-Sea Research, Part II, 56(8-10):630-639.

Dickey, T., N. Bates, R.H. Byrne, G. Chang, F.P. Chavez, R.A. Feely, A.K. Hanson, D.M. Karl, D. Manov, C. Moore, C.L. Sabine, and R. Wanninkhof, 2009: The NOPP O-SCOPE and MOSEAN projects: Advanced sensing for ocean observing systems. Oceanography, 22(2):168-181.

Di Nezio, P.N., L.J. Gramer, W.E. Johns, C.S. Meinen, and M.O. Baringer, 2009: Observed interannual variability of the Florida Current: Wind forcing and the North Atlantic oscillation. Journal of Physical Oceanography, 39(3):721-736.

Doney, S.C., I. Lima, R.A. Feely, D.M. Glover, K. Lindsay, N. Mahowald, J.K. Moore, and R. Wanninkhof, 2009: mechanisms governing interannual variability in upper-ocean inorganic carbon system and air-sea CO2 fluxes: Physical climate and atmospheric dust. Deep-Sea Research, Part II, 56(8-10):640-655.

Elmir, S.M., T. Shibata, H.M. Solo-Gabriele, C.D. Sinigalliano, M.L. Gidley, G. Miller, L.R.W. Plano, J. Kish, K. Withum, and L.E. Fleming, 2009: Quantitative evaluation of enterococci and bacteroidales released by adults and toddlers in marine water. Water Research, 43(18):4610-4616.

Gentemann, C.L., P.J. Minnett, J. Sienkiewicz, M. DeMaria, J. Cummings, Y. Jin, J.D. Doyle, L. GRAMER, C.N. Barron, K.S. Casey, and C.J. Donlon, 2009: MISST: The Multi-sensor Improved Sea Surface Temperature Project. Oceanography, 22(2):76-87.

Gledhill, D.K., R. Wanninkhof, and C.M. Eakin, 2009: Observing ocean acidification from space. Oceanography, 22(4):48-60.

Goodwin, K.D., and M. Pobuda, 2009: Performance of CHROMagarTM Staph aureus and CHROMagarTM MRSA for detection of Staphylococcus aureus in seawater and beach sand: Comparison of culture, agglutination, and molecular analyses. Water Research, 43(19):4802-4811.

Goodwin, K.D., L. Matragrano, D. Wanless, C.D. Sinigalliano, and M.J. LAGIER, 2009: A preliminary investigation of fecal indicator bacteria, human pathogens, and source tracking markers in beach water and sand. Environmental Research Journal, 2(4):395-417.

Gramer, L.J., E.M. Johns, J.C. Hendee, and C. Hu, 2009: Characterization of biologically significant hydrodynamic anomalies on the Florida Reef Tract. Proceedings, 11th International Coral Reef Symposium, Ft. Lauderdale, FL, July 7-11, 2008. International Society for Reef Studies, 470-474.

Hendee, J.C., L.J. Gramer, D. Manzello, and M. Jankulak, 2009: Ecological forecasting for coral reef ecosystems. Proceedings, 11th International Coral Reef Symposium, Ft. Lauderdale, FL, July 7-11, 2008. International Society for Reef Studies, 534-538.

Hu, C., F. Muller-Karger, B. Murch, D. Myhre, J. Taylor, R. Luerssen, C. Moses, C. Zhang, L. GRAMER, and J. Hendee, 2009: Building an automated integrated observing system to detect sea surface temperature anomaly events in the Florida Keys. IEEE Transactions on Geoscience and Remote Sensing, 47(6):1607-1620.

Huang, X.-L., and J.-Z. Zhang, 2009: Neutral persulfate digestion at sub-boiling temperature in an oven for total dissolved phosphorus determination in natural waters. Talanta, 78(3):1129-1135.

Jankulak, M., J.C. Hendee, and M. Shoemaker, 2009: The instrumental architecture of a Coral Reef Early Warning System (CREWS) station. Proceedings, 11th International Coral Reef Symposium, Ft. Lauderdale, FL, July 7-11, 2008. International Society for Reef Studies, 544-548.

Lirman, D., and D.P. Manzello, 2009: Patterns of resistance and resilience of the stress-tolerant coral Siderastrea radians (Pallas) to sub-optimal salinity and sediment burial. Journal of Experimental Marine Biology and Ecology, 369(1):72-77.

Manzello, D.P., 2009: Reef development and resilience to acute (El Niño warming) and chronic (high-CO2) disturbances in the eastern tropical Pacific: A real-world climate change model. Proceedings, 11th International Coral Reef Symposium, Ft. Lauderdale, FL, July 7-11, 2008. International Society for Reef Studies, 1299-1304.

Manzello, D.P., M. Warner, E. Stabenau, J. Hendee, M. Lesser, and M. Jankulak, 2009: Remote monitoring of chlorophyll fluorescence in two reef corals during the 2005 bleaching event at Lee Stocking Island, Bahamas. Coral Reefs, 28(1):209-214.

Palmer, D.R., 2009: Coherent and incoherent scattering by a plume of particles advected by turbulent velocity flow. Journal of the Acoustical Society of America, 126(2):587-598.

Pierrot, D., C. Neil, K. Sullivan, R. Castle, R. Wanninkhof, H. Lueger, T. Johannessen, A. Olsen, R.A. Feely, and C.E. Cosca, 2009: Recommendations for autonomous underway pCO2 measuring systems and data reduction routines. Deep-Sea Research, Part II, 56(8-10):512-522.

Rodgers, K.B., R.M. Key, A. Gnanadesikan, J.L. Sarmiento, O. Aumont, L. Bopp, S.C. Doney, J.P. Dunne, D.M. Glover, A. Ishida, M. Ishii, A.R. Jacobson, C.L. Monaco, E. Maier-Reimer, H. Mercier, N. Metzl, F.F. Perez, A.F. Rios, R. Wanninkhof, P. Wetzel, C.D. Winn, and Y. Yamanaka, 2009: Using altimetry to help to explain patchy changes in hydrographic carbon measurements. Journal of Geophysical Research, 114(C9):C09013, doi:10.1029/2008JC005183.

Rosario, K., E.M. Symonds, C. Sinigalliano, J. Stewart, and M. Breitbart, 2009: Pepper mild mottle virus as an indicator of fecal pollution. Applied and Environmental Microbiology, 75(22):7261-7267.

Sabine, C.L., R.A. Feely, R. Wanninkhof, and T. Takahashi, 2009: The global ocean carbon cycle. In State of the Climate in 2008, T.C. Peterson and M.O. Baringer (eds.). Bulletin of the American Meteorological Society, 90(8):S65-S68.

Scorzetti, G., L.E. Brand, G.L. Hitchcock, K.S. Rein, C.D. Sinigalliano, and J.W. Fell, 2009: Multiple simultaneous detection of harmful algal blooms (HABs) through a high throughput bead array technology, with potential use in phytoplankton community analysis. Harmful Algae, 8(2):196-211.

Sinigalliano, C.D., J. Winshell, M.A. Guerrero, G. Scorzetti, J.W. Fell, R.W. Eaton, L. Brand, and K.S. Rein, 2009: Viable cell sorting of dinoflagellates by multiparametric flow cytometry. Phycologia, 48(4):249-257.

Takahashi, T., S.C. Sutherland, R. Wanninkhof, C. Sweeney, R.A. Feely, D.W. Chipman, B. Hales, G. Friederich, F. Chavez, C. Sabine, A. Watson, D.C.E. Bakker, U. Schuster, N. Metzl, H. Yoshikawa-Inoue, M. Ishii, T. Midorikawa, Y. Nojiri, A. Kortzinger, T. Steinhoff, M. Hoppema, J. Olafsson, T.S. Arnarson, B. Tilbrook, T. Johannessen, A. Olsen, R. Bellerby, C.S. Wong, B. Delille, N.R. Bates, and H.J.W. de Baar, 2009: Climatological mean and decadal change in surface ocean pCO2 and net sea-air CO2 flux over the global oceans. Deep-Sea Research, Part II, 56(8-10):554-577.

Telszewski, M., A. Chazottes, U. Schuster, A.J. Watson, C. Moulin, D.C.E. Bakker, M. González-Dávila, T. Johannessen, A. Körtzinger, H. Lueger, A. Olsen, A. Omar, X.A. Padin, A.F. Rios, T. Steinhoff, M. Santana-Casiano, D.W.R. Wallace, and R. Wanninkhof, 2009: Estimating the monthly pCO2 distribution in the North Atlantic using a self-organizing neural network. Biogeosciences, 6(8):1405-1421.

Wanninkhof, R., W.E. Asher, D.T. Ho, C.S. Sweeney, and W.R. McGillis, 2009: Advances in quantifying air-sea gas exchange and environmental forcing. Annual Reviews in Marine Science, 1:213-244.

Watson, A.J., U. Schuster, D.C.E. Bakker, N.R. Bates, A. Corbiere, M. Gonzalez-Davila, T. Friedrich, J. Hauck, C. Heinze, T. Johannessen, A. Kortzinger, N. Metzl, J. Olafsson, A. Olsen, A. Oschlies, X.A. Padin, B. Pfeil, J.M. Santana-Casiano, T. Steinhoff, M. Telszewski, A.F. Rios, D.W.R. Wallace, and R. Wanninkhof, 2009: Tracking the variable North Atlantic sink for atmospheric CO2. Science, 326(5958):1391-1393.

Zhang, J.-Z., C.R. Kelble, C.J. Fischer, and L.D. Moore, 2009: Hurricane Katrina induced nutrient runoff from an agricultural area to coastal waters in Biscayne Bay, Florida. Estuarine, Coastal, and Shelf Science, 84(2):209-218.

2008

Amornthammarong, N., and J.-Z. ZHANG, 2008: Shipboard fluorometric flow analyzer for high-resolution underway measurement of ammonium in seawater. Analytical Chemistry, 80(4):1019-1026.

Gledhill, D.K., R. Wanninkhof, F.J. Millero, and M. Eakin, 2008: Ocean acidification of the greater Caribbean region, 1996-2006. Journal of Geophysical Research, 113(C10):C10031, doi:10.1029/2007JC004629.

Godin, O.E., and D.R. PALMER (eds.), 2008: History of Russian Underwater Acoustics. World Scientific Publishing Company, 1211 pp.

Goodwin, K.D., and R.W. Litaker, 2008: Emerging technologies for monitoring recreational waters for bacteria and viruses. In Oceans and Human Health: Risk and Remedies from the Seas, P.J. Walsh, S.L. Smith, W.H. Gerwick, H. Solo-Gabriele, and L.E. Fleming (eds.). Elsevier Science Publishers, New York, 381-404.

Goodwin, K.D., L. Matragrano, and M.J. Lagier, 2008: The possibility of false negative results hampers the ability to elucidate the relationship between fecal indicator bacteria and human pathogens and source tracking markers in beach water and sand. In Marine Pollution: New Research, T.N. Hofer (ed.). Nova Science Publishers, Inc., New York, 255-277.

Hendee, J.C., L. Gramer, D.P. Manzello, and M. Jankulak, 2008: Integrating near real-time data for coral reef ecological forecasting. Proceedings of the Gulf and Caribbean Fisheries Institute, 59:525-528.

Hendee, J.C., L. Gramer, J.A. Kleypas, D.P. Manzello, M. Jankulak, and C. Langdon, 2008: The Integrated Coral Observing Network (ICON): Sensor solutions for sensitive sites. Proceedings, Third International Conference on Intelligent Sensors, Sensor Networks, and Information Processing, Melbourne, Australia, December 3-6, 2007. Institute of Electrical and Electronics Engineers (IEEE), 669-673.

Hitchcock, G.L., W.S. Arnold, M. Frischer, C.R. Kelble, and R.K. Cowen, 2008: Short-term dispersal of an intentionally-released patch of larval Mercenaria Spp. In the Indian River Lagoon, Florida, USA. Bulletin of Marine Science, 82(1):41-57.

Huang, X.-L., and J.-Z. Zhang, 2008: Kinetic spectrophotometric determination of submicromolar orthophosphate by molybdate reduction. Microchemical Journal, 89(1):58-71.

Huang, X.-L., and J.-Z. Zhang, 2008: Rate of phosphoantimonylmolybdenum blue complex formation in acidic persulfate digested sample matrix for total dissolved phosphorus determination: Importance of post-digestion pH adjustment. Talanta, 77(1):340-345.

Huang, X.-L., Y. Chen, and M. Shenker, 2008: Chemical fractionation of phosphorus in stabilized biosolids. Journal of Environmental Quality, 37(5):1949-1958.

Jiang, L.-Q., W.-J. Cai, R. Wanninkhof, Y. Wang, and H. Lueger, 2008: Air-sea CO2 fluxes on the U.S. South Atlantic Bight: Spatial and seasonal variability. Journal of Geophysical Research, 113(C7):C07019, doi:10.1029/2007JC004366.

Lee, T.N., N. Melo, E. Johns, C. Kelble, R.H. Smith, and P.B. Ortner, 2008: On water renewal and salinity variability in the northeast subregion of Florida Bay. Bulletin of Marine Science, 82(1):83-105.

Levine, N.M., S.C. Doney, R. Wanninkhof, K. Lindsay, and I.Y. Fung, 2008: Impact of ocean carbon system variability on the detection of temporal increases in anthropogenic CO2. Journal of Geophysical Research, 113(C3):C03019, doi:10.1029/2007JC004153.

Li, Q.P., D.A. Hansell, and J.-Z. Zhang, 2008: Underway monitoring of nanomolar nitrate plus nitrite and phosphate in oligotrophic seawater. Limnology and Oceanography: Methods, 6:319-326.

Manzello, D.P., 2008: Short and long-term ramifications of climate change upon coral reef ecosystems: Case studies across two oceans. Ph.D. thesis, University of Miami, Rosenstiel School of Marine and Atmospheric Science, 82 pp.

Manzello, D.P., J.A. Kleypas, D.A. Budd, C.M. Eakin, P.W. Glynn, and C. Langdon, 2008: Poorly cemented coral reefs of the eastern tropical Pacific: Possible insights into reef development in a high-CO2 world. Proceeding of the National Academy of Sciences, 105(30):10,450-10,455.

Palmer, C.J., T.D. Bonilla, J.A. Bonilla, S. Elmir, K.D. Goodwin, H.M. Solo-Gabriele, and A. Abdelzaher, 2008: The future for monitoring. In Oceans and Human Health: Risk and Remedies from the Seas, P.J. Walsh, S.L. Smith, W.H. Gerwick, H. Solo-Gabriele, and L.E. Fleming (eds.). Elsevier Science Publishers, New York, 405-429.

Park, G.-H., K. Lee, R. Wanninkhof, J.-Z. ZHANG, D.A. Hansell, and R.A. Feely, 2008: Large, non-Redfieldian drawdown of nutrients and carbon in the extratropical North Atlantic Ocean (46°N): Evidence for dinitrogen fixation? Limnology and Oceanography, 53(5):1697-1704.

Sabine, C.L., R.A. Feely, R. Wanninkhof, and T. Takahashi, 2008: The global ocean carbon cycle. In State of the Climate in 2007, D.H. Levinson and J.H. Lawrimore (eds.). Bulletin of the American Meteorological Society, 88(7):S52-S56.

Serafy, J.E., C.R. Kelble, T.R. Capo, S.A. Luthy and P.B. Ortner, 2008: Vertical movement rates of captive larval billfishes (Istiophoridae) collected from the Straits of Florida. Florida Scientist, 71(1):23-30.

Stewart, J.R., R.J. Gast, R.S. Fujioka, H.M. Solo-Gabriele, J.S. Meschke, L.A. Amaral-Zettler, E. Del Castillo, M.F. Polz, T.K. Collier, M.S. Strom, C.D. SINIGALLIANO, P.D.R. Moeller, and A.F. Holland, 2008: The coastal environment and human health: Microbial indicators, pathogens, sentinels and reservoirs. Environmental Health, 7(Suppl. 2):S3, doi:10.1186/1476-069X-7-S2-S3.

Thomas, H., A.E.F. Prowe, I.D. Lima, S.C. Doney, R. Wanninkhof, R.J. Greatbatch, U. Schuster, and A. Corbiere, 2008: Changes in the North Atlantic Oscillation influence CO2 uptake in the North Atlantic over the past two decades. Global Biogeochemical Cycles, 22(4):GB4027, doi:10.1029/2007GB003167.

Voss, D., H. Maring, and K.D. Goodwin, 2008: Production of salt aerosol and bioaerosol from a sea-salt aerosol generator. In Marine Pollution: New Research, T.N. Hofer (ed.). Nova Science Publishers, Inc., New York, 398-429.

2007

Baums, I.B., K.D. Goodwin, T.L. Kiesling, D. Wanless, M.R. Diaz, and J.W. Fell, 2007: Luminex detection of fecal indicators in river samples, marine recreational water, and beach sand. Marine Pollution Bulletin, 54(5):521-536.

Borges, A.V., and R. Wanninkhof, 2007: Preface: 37th International Liege Colloquium on Ocean Dynamics, Liege, Belgium, May 2-6, 2005, 5th International Symposium on Gas Transfer at Water Surfaces. Journal of Marine Systems, 66(1-4):1-3.

Broecker, W.S., and R. Wanninkhof, 2007: Mono Lake radiocarbon: The mystery deepens. EOS, Transactions, American Geophysical Union, 88(12):141-142.

Chavez, F.P., T. Takahashi, W.-J. Cai, G. Friederich, B. Hales, R. Wanninkhof, and R.A. Feely, 2007: Coastal oceans, pp. 157-166. In The First State of the Carbon Cycle Report (SOCCR): The North American Carbon Budget and Implications for the Global Carbon Cycle. Report by the U.S. Climate Change Science Program and the Subcommittee on Global Change Research, A.W. King, L. Dilling, G.P. Zimmerman, D.M. Fairman, R.A. Houghton, G. Marland, A.Z. Rose, and T.J. Wilbanks (eds.). National Oceanic and Atmospheric Administration, National Climatic Data Center, Asheville, NC, USA, 264 pp.

Huang, X.-L., Y. Chen, and M. Shenker, 2007: Solid phosphorus phases in aluminum- and iron treated biosolids. Journal of Environmental Quality, 36(2):549-556.

Jurado, J.L., G.L. Hitchcock, and P.B. Ortner, 2007: Seasonal variability of nutrient and phytoplankton distributions on the southwest Florida inner shelf. Bulletin of Marine Science, 80(1):21-43.

Kelble, C.R., E.M. Johns, W.K. Nuttle, T.N. Lee, R.H. Smith, and P.B. ORTNER, 2007: Salinity patterns of Florida Bay. Estuarine, Coastal, and Shelf Science, 71(1-2):318-334.

Lagier, M.J., J.W. Fell, and K.D. Goodwin, 2007: Electrochemical detection of harmful algae and other microbial contaminants in coastal waters using hand-held biosensors. Marine Pollution Bulletin, 54(6):757-770.

Manzello, D.P., R. Berkelmans, and J.C. Hendee, 2007: Coral bleaching indices and thresholds for the Florida Reef Tract, Bahamas, and St. Croix, U.S. Virgin Islands. Marine Pollution Bulletin, 54(12):1923-1931.

Manzello, D.P., M. Brandt, T.B. Smith, D. Lirman, J.C. Hendee, and R.S. Nemeth, 2007: Hurricanes benefit bleached corals. Proceedings of the National Academy of Sciences, 104(29):12,035-12,039.

McGillis, W.R., J.H. Dacey, J.D. Ware, D.T. Ho, J.T. Bent, W.E. Asher, C.J. Zappa, P.A. Raymond, R. Wanninkhof, and S. Komori, 2007: Air-water reconciliation between the atmospheric CO2 profile and mass balance techniques. In Transport at the Air-Sea Interface: Measurements, Models, and Parameterizations, C.S. Garbe, R.A. Handler, and B. Jahne (eds.). Springer-Verlag, Berlin, 181-192.

Nacapricha, D., N. Amornthammarong, K. Sereenonchai, P. Anujarawat, and P. Wilairat, 2007: Low cost telemetry with PC sound card for chemical analysis applications. Talanta, 71(2):605-609.

Sabine, C.L., R.A. Feely, and R. Wanninkhof, 2007: Global oceans: Global ocean carbon cycle. In State of the Climate in 2006, A. Arguez, A.M. Waple, and A.M. Sanchez-Lugo (eds.). Bulletin of the American Meteorological Society, 88(6):S40-S43.

Sereenonchai, K., P. Saetear, N. Amornthammarong, K. Uraisin, P. Wilairat, S. Motomizu, and D. Nacapricha, 2007: Membraneless vaporization unit for direct analysis of solid sample. Analytica Chimica Acta, 597(1):157-162.

Sinigalliano, C.D., M.B. Gidley, T. Shibata, D. Whitman, T.H. Dixon, E. Laws, A. Hou, D. Bachoon, L. Brand, L. Amaral-Zettler, R.J. Gast, G.F. Steward, O.D. Nigro, R. Fujioka, W.Q. Betancourt, G. Vithanage, J. Mathews, L.E. Fleming, and H.M. Solo-Gabriele, 2007: Impacts of Hurricanes Katrina and Rita on the microbial landscape of the New Orleans area. Proceedings of the National Academy of Sciences, 104(21):9029-9034.

Sweeney, C., E. Gloor, A.R. Jacobson, R.M. Key, G. McKinley, J.L. Sarmiento, and R. Wanninkhof, 2007: Constraining global air-sea gas exchange for CO2 with recent bomb 14C measurements. Global Biogeochemical Cycles, 21(2):GB2015, doi:10.1029/2006GB002784.

Wang, Z.A., X. Liu, R.H. Byrne, R. Wanninkhof, R.E. Bernstein, E.A. Kaltenbacher, and J. Patten, 2007: Simultaneous spectrophotometric flow-through measurements of pH, carbon dioxide fugacity, and total inorganic carbon in seawater. Analytica Chimica Acta, 596(1):23-36.

Wanninkhof, R., 2007: The impact of different gas exchange formulations and wind speed products on global air-sea CO2 fluxes. In Transport at the Air-Sea Interface: Measurements, Models, and Parameterizations, C.S. Garbe, R.A. Handler, and B. Jahne (eds.). Springer-Verlag, Berlin, 1-23.

Wanninkhof, R., A. Olsen, and J.A. Trinanes, 2007: Air-sea CO2 fluxes in the Caribbean Sea from 2002-2004. Journal of Marine Systems, 66(1-4):272-284.

Zhang, J.-Z., and X.-L. Huang, 2007: Relative importance of solid-phase phosphorus and iron on the sorption behavior of sediments. Environmental Science and Technology, 41(8):2789-2795.

2006

Feely, R.A., T. Takahashi, R. Wanninkhof, M.J. McPhaden, C.E. Cosca, S.C. Sutherland, and M.-E. Carr. Decadal variability of the air-sea CO2 fluxes in the equatorial Pacific Ocean, 2006: Journal of Geophysical Research, 111(C8):C08S90, doi:10.1029/2005JC003129.

Huang, X.-L., and J.-Z. Zhang, 2006: Surfactant-sensitized malachite green method for trace determination of orthophosphate in aqueous solution. Analytica Chimica Acta, 580(1):55-67.

Lee, K., L.T. Tong, F.J. Millero, C.L. Sabine, A.G. Dickson, C. Goyet, G.-H. Park, R. Wanninkhof, R.A. Feely, and R.M. Key, 2006: Global relationships of total alkalinity with salinity and temperature in surface waters of the world's oceans. Geophysical Research Letters, 33(19):L19605, doi:10.1029/2006GL027207.

Lee, T.N., E. Johns, N. Melo, R.H. Smith, P.B. Ortner, and N. Smith, 2006: On Florida Bay hypersalinity and water exchange. Bulletin of Marine Science, 70(2):301-327.

Li, Y.-H., L. Menviel, and T.-H. Peng, 2006: Nitrate deficits by nitrification and denitrification processes in the Indian Ocean. Deep-Sea Research, Part I, 53(1):94-110.

Lindberg, W.J., T.K. Frazer, K.P. Portier, F. Vose, J. Loftin, D. Murie, D.M. MASON, B. Nagy, and M. Hart, 2006: Factors regulating density and performance of gag grouper: Density-dependent habitat selection for shelter. Ecological Applications, 16(2):731-746.

Lueger, H., R. Wanninkhof, D.W.R. Wallace, and A. Kortzinger, 2006: CO2 fluxes in the subtropical and subarctic North Atlantic based on measurements from a volunteer observing ship. Journal of Geophysical Research, 111(6):C06024, doi:10.1029/2005JC003101.

Manzello, D., J.C. Hendee, D. Ward, and Z. Hillis-Starr, 2006: An evaluation of environmental parameters coincident with the partial bleaching event in St. Croix, U.S. Virgin Islands (2003). Proceedings, 10th International Coral Reef Symposium, Okinawa, Japan, June 28-July 2, 2004. Japanese Coral Reef Society, 709-717.

McGillis, W.R., and R. Wanninkhof, 2006: Aqueous CO2 gradients for air-sea flux estimates. Marine Chemistry, 98(1):100-108.

Park, G.-H., K. Lee, R. Wanninkhof, and R.A. Feely, 2006: Empirical temperature-based estimates of variability in the oceanic uptake of CO2 over the past two decades. Journal of Geophysical Research, 111(C7):C07S07, doi:10.1029/2005JC003090.

Plattner, S., D.M. Mason, G.A. Leshkevich, D.J. Schwab, and E.S. Rutherford, 2006: Classifying and forecasting coastal upwellings in Lake Michigan using satellite-derived temperature images and buoy data. Journal of Great Lakes Research, 32(1):63-76.

Sabine, C.L., R.A. Feely, and R. Wanninkhof, 2006: Global oceans: Ocean carbon. In State of the Climate in 2005, K.A. Shein, A.M. Waple, H.J. Diamond, and J.M. Levy. Bulletin of the American Meteorological Society, 87(6):S29-S30.

Serafy, J.E., T.R. Capo, and C.R. Kelble, 2006: Live capture of larval billfishes: Design and field testing of the continuous access Neuston observation net (CANON). Bulletin of Marine Science, 79(3):853-857.

Stabenau, E.R., J.C. Hendee, and L. Florit, 2006: Techniques for the automated assessment of intense light and high sea temperature on coral response. Proceedings, 10th International Coral Reef Symposium, Okinawa, Japan, June 28-July 2, 2004. Japanese Coral Reef Society, 702-708.

Takahashi, T., S.C. Sutherland, R.A. Feely, and R. Wanninkhof, 2006: Decadal change of the surface water pCO2 in the North Pacific: A synthesis of 35 years of observations. Journal of Geophysical Research, 111(C7):C07S05, doi:10.1029/2005JC003074.

Zhang, J.-Z., 2006: Enhanced sensitivity in flow injection analysis using a long pathlength liquid waveguide capillary flow cell for spectrophotometric detection. Analytical Sciences, 22(1):57-60 (2006).

Zhang, J.-Z., and C.J. Fischer, 2006: A simplified resorcinol method for direct spectrophotometric determination of nitrate in seawater. Marine Chemistry, 99(1-4):220-226 (2006).

2005

Arnold, W.S., G.L. Hitchcock, M.E. Frischer, R. Wanninkhof, and Y.P. Sheng, 2005: Dispersal of an introduced larval cohort in a coastal lagoon. Limnology and Oceanography, 50(2):587-597.

Browder, J.A., R. Alleman, S. Markeley, P.B. Ortner, and P.A. Pitts, 2005: Biscayne Bay conceptional ecological model. Wetlands, 25(4):854-869.

Carsey, T.P., and H.E. Willoughby, 2005: Ozone measurements from eyewall transects of two Atlantic tropical cyclones. Monthly Weather Review, 133(1):166-174.

Feely, R.A., L.D. Talley, G.C. Johnson, C.L. Sabine, and R. Wanninkhof, 2005: Repeat hydrography cruises reveal chemical changes in the North Atlantic. EOS, Transactions, American Geophysical Union, 86(42):399, 404-405.

Goodwin, K.D., S.A. Cotton, G. Scorzetti, and J.W. Fell, 2005: A DNA hybridization assay to identify toxic dinoflagellates in coastal waters: Detection of Karenia Brevis in the Rookery Bay National Estuarine Research Reserve. Harmful Algae, 4(2):411-422.

Goodwin, K.D., R. Tokarczyk, F.C. Stephens, and E.S. Saltzman, 2005: Description of toulene inhibition of methyl bromide biodegradation in seawater and isolation of a marine toluene oxidizer that degrades methyl bromide. Applied and Environmental Microbiology, 71(7):3495-3503.

Hendee, J.C., E.R. STABENAU, L. FLORIT, D. MANZELLO, and C. JEFFRIS, 2005: Infrastructure and capabilities of a near real-time meteorological and oceanographic in situ instrumented array and its role in marine environmental decision support. In Remote Sensing of Aquatic Coastal Ecosystem Processes, L.L. Richardson and E.F. LeDrew (eds.). Springer Verlag, Volume 9, 135-156.

Hitchcock, G.L., T.N. Lee, P.B. Ortner, S.R. Cummings, C.R. Kelble, and E. Williams, 2005: Property fields in a Tortugas eddy. Deep-Sea Research, Part I, 52(12):2195-2213.

Hu, C., F.E. Muller-Karger, C. Taylor, K.L. Carder, C. Kelble, E. Johns, and C.A. Heil, 2005: Red tide detection and tracing using MODIS fluorescence data: A regional example in southwest Florida coastal waters. Remote Sensing of Environment, 97(3):311-321.

Kelble, C.R., P.B. Ortner, G.L. Hitchcock, and J.N. Boyer, 2005: A re-examination of the light environment of Florida Bay. Estuaries, 28(4):560-571.

Kim. D.-O., K. Lee, S.-D. Choi, H.-S. Kang, J.-Z. Zhang, and Y.-S. Chang, 2005: Determination of diapycnal diffusion rates in the upper thermocline in the North Atlantic Ocean using sulfur hexafluoride. Journal of Geophysical Research, 110(C10):C10010, doi:10.1029/2004JC002835.

LI, Q.P., J.-Z. Zhang, F.J. Millero, and D.A. Hansell, 2005: Continuous colorimetric determination of trace ammonium in seawater with a long-path liquid waveguide capillary cell. Marine Chemistry, 96(1-2):73-85.

MASON, D.M., T.B. Johnson, C.J. Harvey, J.F. Kitchell, S.T. Schram, C.R. Bronte, M.H. Hoff, S.T. Lozano, A.S. Trebitz, D.R. Schreiner, E.C. Lamon, and T. Hrabik, 2005: Hydroacoustic estimates of abundance and spatial distribution of pelagic prey fishes in western Lake Superior. Journal of Great Lakes Research, 31(4):426-438.

McNeil, C., D. Katz, R. Wanninkhof, and B. Johnson, 2005: Continuous shipboard sampling of gas tension, oxygen, and nitrogen. Deep-Sea Research, Part I, 52(9):1767-1785.

Olsen, A., R. Wanninkhof, J.A. Trinanes, and T. Johannessen, 2005: The effect of wind speed products and wind speed-gas exchange relationships on interannual variability of the air-sea CO2 gas transfer velocity. Tellus B, 57(2):95-106.

Palmer, D.R., 2005: Acoustical scattering from constituents of an ocean plume located near a boundary surface. IEEE Transactions on Geoscience and Remote Sensing, 43(4):770-777.

Palmer, D.R., and P.A. Rona, 2005: Acoustical imaging of deep ocean hydrothermal flows. In Sounds in the Sea: From Ocean Acoustics to Acoustical Oceanography, H. Medwin (ed.). Cambridge University Press, 551-563.

Peng, T.-H., 2005: Anthropogenic CO2 in the ocean. Scientia Marina, 69(suppl. 1):85-96.

Rudnick, D.T., P.B. Ortner, J.A. Browder, and S.M. Davis, 2005: A conceptual ecological model of Florida Bay. Wetlands, 25(4):870-883.

Wanninkhof, R., K.F. Sullivan, W.P. Dammann, J.R. Proni, F. Bloetscher, P. Cooke, A. Soloviev, and T.P. CARSEY, 2005: Far-field tracing of a point source fresh water discharge in the coastal ocean using sulfur hexafluoride. Environmental Science and Technology, 39(22):8883-8890.

2004

Coale, K.H., K.S. Johnson, F.P. Chavez, K.O. Buesseler, R.T. Barber, M.A. Brzezinski, W.P. Cochlan, F.J. Millero, P.G. Falkowski, J.E. Bauer, R.H. Wanninkhof, R.M. Kudela, M.A. Altabet, B.E. Hales, T. Takahashi, M.R. Landry, R.R. Bidigare, X. Wang, Z. Chase, P.G. Strutton, G.E. Friederich, M.Y. Gorbunov, V.P. Lance, A.K. Hilting, M.R. Hiscock, M. Demarest, W.T. Hiscock, K.F. SULLIVAN, S.J. Tanner, R.M. Gordon, C.N. Hunter, V.A. Elrod, S.E. Fitzwater, J.L. Jones, S. Tozzi, M. Koblizek, A.E. Roberts, J. Herndon, J. Brewster, N. Ladizinsky, G. Smith, D. Cooper, D. Timothy, S.L. Brown, K.E. Selph, C.C. Sheridan, B.S. Twining, and Z.I. Johnson, 2004: Southern Ocean Iron Enrichment Experiment: Carbon cycling in high and low Si waters. Science, 304(5669):408-414.

DeGrandpre, M.D., R.H. Wanninkhof, W.R. McGillis, and P.G. Strutton, 2004: A Lagrangian study of surface pCO2 dynamics in the eastern equatorial Pacific Ocean. Journal of Geophysical Research, 109(C8):C08S07, doi:10.1029/2003JC002089.

Dugdale, R.C., M. Lyle, F.P. Wilkerson, F. Chai, R.T. Barber, and T.-H. PENG, 2004: Influence of equatorial diatom processes on Si deposition and atmospheric CO2 cycles at glacial/interglacial time scales. Paleoceanography, 19(3):PA3011, doi:10.1029/2003PA000929.

Feely, R.A., R.H. Wanninkhof, W.R. McGillis, M.-E. Carr, and C.E. Cosca, 2004: Effects of wind speed and gas exchange parameterizations on the air-sea CO2 fluxes in the equatorial Pacific Ocean. Journal of Geophysical Research, 109(C8):C08S03, doi:10.1029/2003JC001896.

Grigorieva, N.G., G.M. Fridman, and D.R. PALMER, 2004: Investigation of near-axial interference effects for propagation in a ducted waveguide. Proceedings, 6th International Conference on Theoretical and Computational Acoustics, Honolulu, HI, August 11-15, 2003. World Scientific Publishing, 129-134.

Guo, L., J.-Z. Zhang, and C. Gueguen, 2004: Speciation and fluxes of nutrients (N, P, Si) from the upper Yukon River. Global Biogeochemical Cycles, 18(1):GB1038, doi:10.1029/2003GB002152.

Hare, J.E., C.W. Fairall, W.R. McGillis, J.B. Edson, B. Ward, and R.H. Wanninkhof, 2004: Evaluation of the National Oceanic and Atmospheric Administration/Coupled-Ocean Atmospheric Response Experiment (NOAA/COARE) air-sea gas transfer parameterization using GasEx data. Journal of Geophysical Research, 109(C8):C08S11, doi:10.1029/2003JC001831.

Key, R.M., A. Kozyr, C.L. Sabine, K. Lee, R. Wanninkhof, J.L. Bullister, R.A. Feely, F.J. Millero, C. Mordy, and T.-H. PENG, 2004: A global ocean carbon climatology: Results from Global Data Analysis Project (GLODAP). Global Biogeochemical Cycles, 18(4):GB40301, doi:10.1029/2004GB002247.

Lawrence, D., M.J. Dagg, H. Liu., S.R. Cummings, P.B. Ortner, and C.R. Kelble, 2004: Wind events and benthic-pelagic coupling in a shallow subtropical bay in Florida. Marine Ecology Progress Series, 266:1-13.

McGillis, W.R., W.E. Asher, R.H. Wanninkhof, A.T. Jessup, and R.A. Feely, 2004: Introduction to special section: Air-sea exchange. Journal of Geophysical Research, 109(C8):C08S01, doi:10.1029/2004JC002605.

McGillis, W.R., J.B. Edson, C.J. Zappa, J.D. Ware, S.P. McKenna, E.A. Terray, J.E. Hare, C.W. Fairall, W. Drennan, M. Donelan, M.D. DeGrandpre, R.H. Wanninkhof, and R.A. Feely, 2004: Air-sea CO2 exchange in the equatorial Pacific. Journal of Geophysical Research, 109(C8):C08S02, doi:10.1029/2003JC002256.

Olsen, A., J.A. Trinanes, and R. Wanninkhof, 2004: Sea-air flux of CO2 in the Caribbean Sea estimated using in situ and remote sensing data. Remote Sensing of Environment, 89(3):309-325.

Sabine, C.L., R.A. Feely, N. Gruber, R.M. Key, K. Lee, J.L. Bullister, R.H. Wanninkhof, C.S. Wong, D.W.R. Wallace, B. Tilbrook, F.J. Millero, T.-H. PENG, A. Kozyr, T. Ono, and A.F. Rios, 2004: The oceanic sink for anthropogenic CO2. Science, 305(5682):367-371.

Saltzman, E.S., M. Aydin, W.J. De Bruyn, D.B. King, and S.A. Yvon-Lewis, 2004: Methyl bromide in pre-industrial air: Measurements from an Antarctic ice core. Journal of Geophysical Research, 109(D5):D05301, doi:10.1029/2003JD004157.

Stabenau, E.R., and R.G. Zika, 2004: Correlation of the absorption coefficient with a reduction in mean mass for dissolved organic matter in southwest Florida river plumes. Marine Chemistry, 89(1-4):55-67.

Stabenau, E.R., R.G. Zepp, E. Bartels, and R.G. Zika, 2004: Role of seagrass Thalassia testudinum as a source of chromophoric dissolved organic matter in coastal south Florida. Marine Ecology Progress Series, 282:59-72.

Suvorov, A.M., V.N. Eremeev, V.N. Belokopytov, A.H. Khaliulin, E.A. Godin, A.V. Ingerov, D.R. Palmer, and S. Levitus, 2004: Digital atlas: Physical oceanography of the Black Sea. In Environmental Control Systems, V.N. Eremeev (ed.). National Academy of Science of Ukraine, Sevastopol, 125-129.

Zhang, J.-Z., C.J. Fischer, and P.B. Ortner, 2004: Potential availability of sedimentary phosphorus to sediment resuspension in Florida Bay. Global Biogeochemical Cycles, 18(4):GB4008, doi:10.1029/2004GB002255.

2003

Ball, W.P., R.R. Dickerson, B.G. Doddridge, J.W. Stehr, T.L. Miller, D.L. Savoie, and T.P. CARSEY, 2003: Bulk and size-segregated aerosol composition observed during INDOEX 1999: Overview of meteorology and continental impacts. Journal of Geophysical Research, 108(D10):8001, doi:10.1029/2002JD002467.

Burkert, J., M.D. Andres-Hernandez, L. Reichert, J. Meyer-Arnek, B. Doddridge, R.R. Dickerson, J. Muhle, A. Zahn, T.P. CARSEY, and J.P. Burrows, 2003: Trace gas and radical diurnal behavior in the marine boundary layer during INDOEX 1999. Journal of Geophysical Research, 108(D8):8000, doi:10.1029/2002JD002790.

Chung, S.-N., K. Lee, R.A. Feely, C.L. Sabine, F.J. Millero, R.H. Wanninkhof, J.L. Bullister, R.M. Key, and T.-H. Peng, 2003: Calcium carbonate budget in the Atlantic Ocean based on water column inorganic carbon chemistry. Global Biogeochemical Cycles, 17(4):1093, doi:10.1029/2002GB002001.

Crusius, J., and R.H. Wanninkhof, 2003: Gas transfer velocities measured at low wind speed over a lake. Limnology and Oceanography, 48(3):1010-1017.

Darrow, B.P., J.J. Walsh, G.A. Vargo, R.T. Masserini, K.A. Fanning, and J.-Z. Zhang, 2003: A simulation study of the growth of benthic microalgae following the decline of a surface phytoplankton bloom. Continental Shelf Research, 23(14-15):1265-1283.

Hendee, J.C., and R. Berkelmans, 2003: Expert system generated coral bleaching alerts for Myrmidon and Agincourt reefs, Great Barrier Reef, Australia. Proceedings, Ninth International Coral Reef Symposium, Bali, Indonesia, October 23-27, 2000. Indonesian Institute of Sciences, 1099-1104.

Jiang, M.-S., F. Chai, R.C. Dugdale, F.P. Wilkerson, T.-H. Peng, and R.T. Barber, 2003: A nitrate and silicate budget in the equatorial Pacific Ocean: A coupled physical-biological model study. Deep-Sea Research, Part II, 50(22-26):2971-2996.

Langdon, C., W.S. Broecker, D.E. Hammond, E. Glenn, K. Fitzsimmons, S.G. Nelson, T.-H. Peng, I. Hajdas, and G. Bonani, 2003: Effect of elevated CO2 on the community metabolism of an experimental coral reef. Global Biogeochemical Cycles, 17(1):1011, doi:10.1029/2002GB001941.

Lee, K., S.-D. Choi, G.-H. Park, R.H. Wanninkhof, T.-H. Peng, R.M. Key, C.L. Sabine, R.A. Feely, J.L. Bullister, F.J. Millero, and A. Kozyr, 2003: An updated anthropogenic CO2 inventory in the Atlantic Ocean. Global Biogeochemical Cycles, 17(4):1116, doi:10.1029/2003GB002067.

Lirman, D., B. Orlando, P. Biber, S. Macia, L. Kaufman, T. Jones, and D. Manzello, 2003: Coral communities of Biscayne Bay, Florida and adjacent offshore areas: Diversity, abundance, distribution, and environmental correlates. Aquatic Conservation: Marine and Freshwater Ecosystems, 13(2):121-135.

Liu, K.-K., T.-H. Peng, P.-T. Shaw, and F.-K. Shiah, 2003: Circulation and biogeochemical processes in the East China Sea and the vicinity of Taiwan: An overview and a brief synthesis. Deep-Sea Research, Part II, 50(6-7):1055-1064.

Macdonald, A.M., M.O. Baringer, R. Wanninkhof, K. Lee, and D.W.R. Wallace, 2003: A 1998-1992 comparison of inorganic carbon and its transport across 24.5°N in the Atlantic. Deep-Sea Research, Part II, 50(22-26):3041-3064.

Manzello, D., and D. Lirman, 2003: The photosynthetic resilience of Porites furcata to salinity disturbance. Coral Reefs, 22(4):537-540.

Palmer, D.R., 2003: On the interpretation of measurements of acoustic backscatter from dredged-material plumes. Journal of Marine Environmental Engineering, 7(2):125-152.

Peng, T.-H., R. Wanninkhof, and R.A. Feely, 2003: Increase of anthropogenic CO2 in the Pacific Ocean over the last two decades. Deep-Sea Research, Part II, 50(22-26):3065-3082.

Proni, J.R., and R.I. McMillen, 2003: Distinguishing ambient sediments at sensitive coastal oceans. In Coastal Engineering VI: Computer Modelling and Experimental Measurements of Seas and Coastal Regions, C.A. Brebbia, D. Almorza, and F. Lopez-Aguayo (eds.). WIT Press, 377-386.

Tokarczyk, R., K.D. Goodwin, and E.S. Saltzman, 2003: Methyl chloride and methyl bromide degradation in the Southern Ocean. Geophysical Research Letters, 30(15):1808, doi:10.1029/2003GL017459.

Tokarczyk, E.S. Saltzman, R.M. Moore, and S.A. Yvon-Lewis, 2003: Biological degradation of methyl chloride in coastal seawater. Global Biogeochemical Cycles, 17(2):1057, doi:10.1029/2002GB001949.

Wallace, D.W.R., and R.H. Wanninkhof, 2003: Ocean-atmosphere exchange and earth-system biogeochemistry. In Marine Science Frontiers for Europe, G. Wefer, F. Lamy, and F. Mantoura (eds.). Springer, Berlin, 107-129.

2002

Asher, W., J. Edson, W.R. McGillis, R.H. Wanninkhof, D.T. Ho, and T. Litchendorf, 2002: Fractional area whitecap coverage and air-sea gas transfer velocities measured during GasEx-98. In Gas Transfer at Water Surfaces, M.A. Donelan, W.M. Drennan, E.S. Saltzman, and R.H. Wanninkhof (eds.). AGU Geophysical Series, Volume 127 (ISBN 0875909868), 199-203.

Berkelmans, R., J.C. Hendee, P.A. Marshall, P.V. Ridd, A.R. Orpin, and D. Irvine, 2002: Automatic weather stations: Tools for managing and monitoring potential impacts to coral reefs. Marine Technology Society Journal, 36(1):29-38.

Chai, F., R.C. Dugdale, T.-H. Peng, F.P. Wilkerson, and R.T. Barber, 2002: One-dimensional ecosystem model of the equatorial Pacific upwelling system. Part I: Model development and silicon and nitrogen cycle. Deep-Sea Research, Part II, 49(13-14):2713-2745.

Donelan, M.A., and R.H. Wanninkhof, 2002: Gas transfer at water surfaces: Concepts and issues. In Gas Transfer at Water Surfaces, M.A. Donelan, W.M. Drennan, E.S. Saltzman, and R.H. Wanninkhof (eds.). AGU Geophysical Monograph Series, Volume 127 (ISBN 0875909868), 1-10.

Dugdale, R.C., R.T. Barber, F. Chai, T.-H. Peng, and F.P. Wilkerson, 2002: One-dimensional ecosystem model of the equatorial Pacific upwelling system. Part II: Sensitivity analysis and comparison with JGOFS EqPac data. Deep-Sea Research, Part II, 49(13-14):2747-2768.

Dugdale, R.C., A.G. Wischmeyer, F.P. Wilkerson, R.T. Barber, F. Chai, M.-S. Jiang, and T.-H. Peng, 2002: Meridional asymmetry of source nutrients to the equatorial Pacific upwelling ecosystem and its potential impact on ocean-atmosphere CO2 flux: A data and modeling approach. Deep-Sea Research, Part II, 49(13-14):2513-2531.

Feely, R.A., R.H. Wanninkhof, D.A. Hansell, M.F. Lamb, D. Greeley, and K. Lee, 2002: Water column CO2 measurements during the GasEx-98 Expedition. In Gas Transfer at Water Surfaces, M.A. Donelan, W.M. Drennan, E.S. Saltzman, and R.H. Wanninkhof (eds.). AGU Geophysical Monograph Series, Volume 127 (ISBN 0875909868), 173-180.

Feely, R.A., C.L. Sabine, K. Lee, F.J. Millero, M.F. Lamb, D. Greeley, J.L. Bullister, R.M. Key, T.-H. Peng, A. Kozyr, T. Ono, and C.S. Wong, 2002: In-situ calcium carbonate dissolution in the Pacific Ocean. Global Biogeochemical Cycles, 16(4):1144, doi:10.1029/2002GB001866.

Feely, R.A., J. Boutin, C.E. Cosca, Y. Dandonneau, J. Etcheto, H.Y. Inoue, M. Ishii, C. Le Quere, D.J. Mackey, M. McPhaden, N. Metzl, A. Poisson, and R.H. Wanninkhof, 2002: Seasonal and interannual variability of CO2 in the equatorial Pacific. Deep-Sea Research, Part II, 49(13-14):2443-2469.

Hitchcock, G.L., P. Lane, S. Smith, J. Luo, and P.B. Ortner, 2002: Zooplankton spatial distributions in coastal waters of the northern Arabian Sea, August 1995. Deep-Sea Research, Part II, 49(12):2403-2423.

Kiesling, T.L., E. Wilkinson, J. Rabalais, P.B. Ortner, M.M. McCabe, and J.W. Fell, 2002: Rapid identification of adult and naupliar stages of copepods using DNA hybridization methodology. Marine Biotechnology, 4(1):30-39.

King, D.B., J.H. Butler, S.A. Yvon-Lewis, and S.A. Cotton, 2002: Predicting oceanic methyl bromide saturation from SST. Geophysical Research Letters, 29(24):2199, doi:10.1029/2002GL016091.

Lamb, M.F., C.L. Sabine, R.A. Feely, R.H. Wanninkhof, R.M. Key, G.C. Johnson, F.J. Millero, K. Lee, T.-H. Peng, A. Kozyr, J.L. Bullister, D. Greeley, R.H. Byrne, D.W. Chipman, A.G. Dickson, C. Goyet, P.R. Guenther, M. Ishii, K.M. Johnson, C.D. Keeling, T. Ono, K. Shitashima, T. Tilbrook, T. Takahashi, D.W.R. Wallace, Y.W. Watanabe, C. Winn, and C.S. Wong, 2002: Consistency and synthesis of Pacific Ocean CO2 survey data. Deep-Sea Research, Part II, 49(1-3):21-58.

Lee, K., D.M. Karl, R. Wanninkhof, and J.-Z. Zhang, 2002: Global estimates of net carbon production in the nitrate-depleted tropical and subtropical oceans. Geophysical Research Letters, 29(19):1907, doi:10.1029/2001GL014198.

Li, Y.-H., and T.-H. Peng, 2002: Latitudinal change of remineralization ratios in the oceans and its implication for nutrient cycles. Global Biogeochemical Cycles, 16(4):1130, doi:10.1029/2001GB001828.

Lirman, D., D. Manzello, and S. Macia, 2002: Back from the dead: The resilence of Siderastrea radians to severe stress. Coral Reefs, 21(3):291-292.

Miller, L.G., and K.D. Goodwin, 2002: Halocarbon biogeochemistry. Biogeochemistry, 60(2):119-120.

Millero, F.J., D. Pierrot, K. Lee, R. Wanninkhof, R. Feely, C.L. Sabine, R.M. Key, and T. Takahashi, 2002: Dissociation constants for carbonic acid determined from field measurements. Deep-Sea Research, Part I, 49(10):1705-1723.

Palmer, D.R., 2002: A parabolic approximation method with application to global wave propagation. Journal of Mathematical Physics, 43(4):1875-1905.

Rona, P.A., D.R. Jackson, K.G. Bemis, C.D. Jones, K. Mitsuzawa, D.R. Palmer, and D. Silver, 2002: Acoustic advances study of sea floor hydrothermal flow. EOS, Transactions, American Geophysical Union, 83(44): 497, 501-502.

Sabine, C.L., R.A. Feely, R.M. Key, J.L. Bullister, F.J. Millero, K. Lee, T.-H. Pemg, B. Tilbrook, T. Ono, and C.S. Wong, 2002: Distribution of anthropogenic CO2 in the Pacific Ocean. Global Biogeochemical Cycles, 16(4):1083, doi:10.1029/2001GB001639.

Schaefer, J.K., K.D. Goodwin, I.R. McDonald, J.C. Murrell, and R.S. Oremland, 2002: Leisingera methylohalidivorans gen. nov., sp. nov., a marine methylotroph that grows on methyl bromide. International Journal of Systematic and Evolutionary Microbiology, 52(3):851-859.

Soloviev, A.V., J. Edson, W.R. McGillis, P. Schluessel, and R.H. Wanninkhof, 2002: Fine thermohaline structure and gas exchange in the near-surface layer of the ocean during GasEx-98. In Gas Transfer at Water Surfaces, M.A. Donelan, W.M. Drennan, E.S. Saltzman, and R.H. Wanninkhof (eds.). AGU Geophysical Monograph Series, Volume 127 (ISBN 0875909868), 181-185.

Takahashi, T., S.C. Sutherland, C. Sweeney, A. Poisson, N. Metzl, B. Tillbrook, N. Bates, R.H. Wanninkhof, R.A. Feely, C.L. Sabine, J. Olafsson, and Y. Nojiri, 2002: Global sea-air CO2 flux based on climatological surface ocean pCO2 and seasonal biological and temperature effects. Deep-Sea Research, Part II, 49(9-10):1601-1622.

Wanninkhof, R.H., S.C. Doney, T. Takahashi, and W.R. McGillis, 2002: The effect of using time-averaged winds on regional air-sea CO2 fluxes. In Gas Transfer at Water Surfaces, M.A. Donelan, W.M. Drennan, E.S. Saltzman, and R.H. Wanninkhof (eds.). AGU Geophysical Monograph Series, Volume 127 (ISBN 0875909868), 351-356.

Ward, B., and P.J. Minnett, 2002: An autonomous profiler for near surface temperature measurements. In Gas Transfer at Water Surfaces, M.A. Donelan, W.M. Drennan, E.S. Saltzman, and R.H. Wanninkhof (eds.). AGU Geophysical Monograph Series, Volume 127 (ISBN 0875909868), 167-172.

Yvon-Lewis, S.A., and J.H. Butler, 2002: Effect of oceanic uptake on atmospheric lifetimes of selected trace gases. Journal of Geophysical Research, 107(D20):4414, doi:10.1029/2001JD001267.

Yvon-Lewis, S.A., J.H. Butler, E.S. Saltzman, P.A. Matrai, D.B. King, R. Tokarczyk, R.M. Moore, and J.-Z. ZHANG, 2002: Methyl bromide cycling in a warm-core eddy of the North Atlantic. Global Biogeochemical Cycles, 16(4):1141, doi:10.1029/2002GB001898.

Zhang, J.-Z., and J. Chi, 2002: Automated analysis of nanomolar concentrations of phosphate in natural waters with liquid waveguide. Environmental Science and Technology, 36(5):1048-1053.

Zhang, J.-Z., and F.J. Millero, 2002: Comment on "A kinetic study of the oxidation of S(IV) in seawater." Environmental Science and Technology, 36(4):817.

Zhang, J.-Z., G.A. Berberian, and R.H. Wanninkhof, 2002: Long-term storage of natural water samples for dissolved oxygen determination. Water Research, 36(16):4165-4168.

2001

Alvarez-Zarikian, C.A., P.K. Swart, T. Hood, P.L. Blackwelder, T.A. Nelsen, and C. Featherstone, 2001: A century of environmental variability in Oyster Bay using ostracode ecological and isotopic data as paleoenvironmental tools. Bulletin of American Paleontology, 361:133-143.

Broecker, W.S., C. Langdon, T. Takahasi, and T.-H. Peng, 2001: Factors controlling the rate of CaCO3 precipitation on Great Bahama Bank. Global Biogeochemical Cycles, 15(3):589-596.

Daly, K.L., W.O. Smith, G.C. Johnson, G.R. DiTullio, D.R. Jones, C.W. Mordy, R.A. Feely, D.A. Hansell, and J.-Z. Zhang, 2001: Hydrography, nutrients, and carbon pools in the Pacific sector of the Southern Ocean: Implications for carbon flux. Journal of Geophysical Research, 106(C4):7107-7124.

Feely, R.A., C.L. Sabine, T. Takahashi, and R.H. Wanninkhof, 2001: Uptake and storage of carbon dioxide in the ocean: The global CO2 survey. Oceanography, 14(4):18-32.

Fine, R.A., K.A. Maillet, K.F. Sullivan, and D. Willey, 2001: Circulation and ventilation flux of the Pacific Ocean. Journal of Geophysical Research, 106(C10):22,159-22,178.

Fine, R.A., L. Merlivat, W. Roether, P. Schlosser, W.M. Smethie, Jr., and R. Wanninkhof, 2001: Observing tracers and the carbon cycle. In Observing the Oceans in the 21st Century: A Strategy for Global Ocean Observations, C.J. Koblinsky and N.R. Smith (eds.). GODAE Project Office and Bureau of Meteorology, Melbourne, Australia, 361-375.

Goodwin, K.D., R.K. Varner, P.M. Crill, and R.S. Oremland, 2001: Consumption of tropospheric levels of methyl bromide by C1 bacteria and comparison to saturation kinetics. Applied and Environmental Microbiology, 67(12):5437-5443.

Hare, J.A., D.E. Hoss, A.B. Powell, M. Konieczna, D.S. Peters, S.R. Cummings, and R. Robbins, 2001: Larval distribution and abundance of the family Scombridae and Scombrolabracidae in the vicinity of Puerto Rico and the Virgin Islands. Bulletin of the Sea Fisheries Institute, 2(153):13-29.

Hendee, J.C., E. Mueller, C. Humphrey, and T. Moore, 2001: A data-driven expert system for producing coral bleaching alerts at Sombrero Reef in the Florida Keys. Bulletin of Marine Science, 69(2):673-684.

Hood, E.M., R.H. Wanninkhof, and L. Merlivat, 2001: Short time scale variations of fCO2 in a North Atlantic warm-core eddy: Results from the GASEX-98 carbon interface ocean atmosphere (CARIOCA) buoy data. Journal of Geophysical Research, 106(C2):2561-2572.

LEE, K., 2001: Global net community production estimated from the annual cycle of surface water total dissolved inorganic carbon. Limnology and Oceanography, 46(6):1287-1297.

McGillis, W.R., J.B. Edson, J.D. Ware, J.W.H. Dacey, J.E. Hare, C.W. Fairall, and R.H. Wanninkhof, 2001: Carbon dioxide flux techniques performed during GasEx-98. Marine Chemistry, 75(4):267-280.

Mikhin, D., 2001: Energy-conserving and reciprocal solutions for higher-order parabolic equations. Journal of Computational Acoustics, 9(1):183-203.

Millero, F.J., W.T. Hiscock, F. Huang, M. Roche, and J.-Z. Zhang, 2001: Seasonal variation of the carbonate system in Florida Bay. Bulletin of Marine Science, 68(1):101-123.

Millero, F.J., F. Huang, X. Zhu, X. Liu, and J.-Z. Zhang, 2001: Adsorption and desorption of phosphate on the calcite and aragonite in seawater. Aquatic Geochemistry, 7(1):33-56.

Nelsen, T.A., G. Garte, C. Featherstone, H.R. Wanless, J.H. Trefry, W.-J. Kang, S. Metz, C. Alvarez-Zarikian, T. Hood, P. Swart, G. Ellis, P. Blackwelder, L. Tedesco, C. Slouch, J.F. Pachut, and M. O'Neal, 2001: Linkages between the South Florida peninsula and coastal zone: A sediment-based history of natural and anthropogenic influences. In The Everglades, Florida Bay, and Coral Reefs of the Florida Keys: An Ecosystem Sourcebook, K.G. Porter and J.W. Porter (eds.). CRC Press (ISBN 0849320267), 415-449.

Tokarczyk, R., K.D. Goodwin, and E.S. Saltzman, 2001: Methyl bromide loss rate constants in the North Pacific Ocean. Geophysical Research Letters, 28(23):4429-4432.

Van de Kreeke, M., A.M. Brun, and T.A. Nelsen, 2001: Sediment exchange and sources of beach sediment, Costa Banderas, Mexico. Shore and Beach, 69(4):19-24.

Zhang, J.-Z.,2001: Oxidation of hydrogen sulfide by various oxidants in natural waters. Trends in Geochemistry, 1(2000):53-68.

Zhang, J.-Z., C.J. Fischer, and P.B. Ortner, 2001: Continuous flow analysis of phosphate in natural waters using hydrazine as a reductant. International Journal of Environmental Chemistry, 80(1):61-73.

Zhang, J.-Z., C.R. Kelble, and F.J. Millero, 2001: Gas-segmented continuous flow analysis of iron in water with a long liquid waveguide capillary flow cell. Analytica Chimica Acta, 438:49-57.

Zhang, J.-Z., R.H. Wanninkhof, and K. Lee, 2001: Enhanced new production observed from the diurnal cycle of nitrate in an oligotrophic anticyclonic eddy. Geophysical Research Letters, 28(8):1579-1582.

2000

Kang, W.-J., J.H. Trefry, T.A. Nelsen, and H.R. Wanless, 2000: Direct atmospheric inputs versus runoff fluxes of mercury to the Lower Everglades and Florida Bay. Environmental Science and Technology, 34(19):4058-4063.

King, D.B., J.H. Butler, S.A. Montzka, S.A. Yvon-Lewis, and J.W. Elkins, 2000: Implications of methyl bromide supersaturations in the temperate North Atlantic Ocean. Journal of Geophysical Research, 105(D15):19,763-19,769.

King, D.B., J.H. Butler, S.A. Montzka, S.A. Yvon-Lewis, and J.W. Elkins, 2000: Corrections to 'Implications of methyl bromide supersaturations in the temperate North Atlantic Ocean.' Journal of Geophysical Research, 105(D20):24,713-24,714.

LEE, K., F.J. Millero, R.H. Byrne, R.A. Feely, and R. Wanninkhof, 2000: The recommended dissociation constants for carbonic acid seawater. Geophysical Research Letters, 27(2):229-232.

LEE, K., R.H. Wanninkhof, R.A. Feely, F.J. Millero, and T.-H. Peng, 2000: Global relationships of total inorganic carbon with temperature and nitrate in surface seawater. Global Biogeochemical Cycles, 14(3):979-994.

Luo, J., P.B. Ortner, D. Forcucci, and S.R. Cummings, 2000: Diel vertical migration of zooplankton and mesopelagic fish in the Arabian Sea. Deep-Sea Research, Part II, 47(7-8):1451-1473.

Peng, T.-H., and F. Chai, 2000: Modeling the carbon cycle in the equatorial Pacific Ocean. Proceedings, Marine Environment: The Past, Present, and Future, Kaohsiung, Taiwan, January 26-28, 1999. Sueichan Press, 240-255.

Sabine, C.L., R.H. Wanninkhof, R.M. Key, C. Goyet, and F.J. Millero, 2000: Seasonal CO2 fluxes in the tropical and subtropical Indian Ocean. Marine Chemistry, 72(1):33-53.

Zhang, J.-Z., 2000: Shipboard automated determination of trace concentrations of nitrite and nitrate in oligotrophic water by gas-segmented continuous flow analysis with a liquid waveguide capillary flow cell. Deep-Sea Research, Part I, 47(6):1157-1171.

Zhang, J.-Z., 2000: The use of pH and buffer intensity to quantify the carbon cycle in the ocean. Marine Chemistry, 70(1-3):121-131.

Zhang, J.-Z., C.J. Fischer, and P.B. Ortner, 2000: Comparison of open tubular cadmium reactors and packed cadmium columns in automated gas-segmented continuous flow nitrate analysis. International Journal of Environmental Analytical Chemistry, 76(2):99-113.

Zhang, J.-Z., C.W. Mordy, L.I. Gordon, A. Ross, and H.E. Garcia, 2000: Temporal trends in deep ocean Redfield ratios. Science, 289(5486):1839.